Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCNT2
  • Mouse genes Ccnt2
  • Rat genes Ccnt2
  • Zfish genes ccnt2a,ccnt2b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccnt2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0097322	7SK snRNA binding	CCNT2	IDA		Human	PMID:11713533
Molecular Function	GO:0003682	chromatin binding	Ccnt2	IDA		Mouse	MGI:MGI:5763368|PMID:16245309
Molecular Function	GO:0005515	protein binding	CCNT2	IPI	UniProtKB:P50750	Human	PMID:15563843
Molecular Function	GO:0005515	protein binding	CCNT2	IPI	UniProtKB:Q99750	Human	PMID:17289077
Molecular Function	GO:0005515	protein binding	CCNT2	IPI	UniProtKB:Q9P1T7	Human	PMID:17289077
Molecular Function	GO:0005515	protein binding	CCNT2	IPI	UniProtKB:Q7L1V2	Human	PMID:21509660
Molecular Function	GO:0005515	protein binding	CCNT2	IPI	UniProtKB:P50750	Human	PMID:21729782
Molecular Function	GO:0005515	protein binding	CCNT2	IPI	UniProtKB:P50750	Human	PMID:23455922
Molecular Function	GO:0005515	protein binding	CCNT2	IPI	UniProtKB:P50750	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	CCNT2	IPI	UniProtKB:P50750	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	CCNT2	IPI	UniProtKB:P50750	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	CCNT2	IPI	UniProtKB:P50750	Human	PMID:9499409
Molecular Function	GO:0005515	protein binding	Ccnt2	IPI	UniProtKB:P10085	Mouse	MGI:MGI:5706918|PMID:12037670
Molecular Function	GO:0070063	RNA polymerase binding	CCNT2	IPI	UniProtKB:P24928	Human	PMID:15563843
Molecular Function	GO:0001223	transcription coactivator binding	CCNT2	IPI	UniProtKB:P06400	Human	PMID:12037672
Cellular Component	GO:0008024	cyclin/CDK positive transcription elongation factor complex	CCNT2	IDA		Human	PMID:9499409
Cellular Component	GO:0005829	cytosol	CCNT2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	CCNT2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CCNT2	IDA		Human	PMID:16109376
Cellular Component	GO:0005634	nucleus	CCNT2	IDA		Human	PMID:21509660
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Ccnt2	IDA		Mouse	MGI:MGI:5706910|PMID:23060074
Cellular Component	GO:0005886	plasma membrane	CCNT2	IDA		Human	GO_REF:0000052
Biological Process	GO:0019085	early viral transcription	CCNT2	IDA		Human	PMID:21509660
Biological Process	GO:0019086	late viral transcription	CCNT2	IDA		Human	PMID:21509660
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	CCNT2	IDA		Human	PMID:15563843
Biological Process	GO:0007519	skeletal muscle tissue development	Ccnt2	IDA		Mouse	MGI:MGI:5706910|PMID:23060074

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern