Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCDC28B
  • Mouse genes Ccdc28b
  • Rat genes Ccdc28b
  • Zfish genes ccdc28b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccdc28b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CCDC28B	IPI	UniProtKB:Q8IWZ6	Human	PMID:16327777
Molecular Function	GO:0005515	protein binding	CCDC28B	IPI	UniProtKB:Q8N3I7	Human	PMID:16327777
Molecular Function	GO:0005515	protein binding	CCDC28B	IPI	UniProtKB:Q8NFJ9	Human	PMID:16327777
Molecular Function	GO:0005515	protein binding	CCDC28B	IPI	UniProtKB:Q8TAM2	Human	PMID:16327777
Molecular Function	GO:0005515	protein binding	CCDC28B	IPI	UniProtKB:Q96RK4	Human	PMID:16327777
Molecular Function	GO:0005515	protein binding	CCDC28B	IPI	UniProtKB:Q9BXC9	Human	PMID:16327777
Molecular Function	GO:0005515	protein binding	CCDC28B	IPI	UniProtKB:Q9NPJ1	Human	PMID:16327777
Molecular Function	GO:0005515	protein binding	CCDC28B	IPI	UniProtKB:Q8WXE1	Human	PMID:25416956
Cellular Component	GO:0005813	centrosome	CCDC28B	IDA		Human	PMID:16327777
Biological Process	GO:0060271	cilium assembly	CCDC28B	IMP		Human	PMID:23015189
Biological Process	GO:0060271	cilium assembly	ccdc28b	IMP	ZFIN:ZDB-MRPHLNO-130129-2	Zfish	PMID:29445114
Biological Process	GO:0060271	cilium assembly	ccdc28b	IMP	ZFIN:ZDB-MRPHLNO-130129-2	Zfish	PMID:23015189
Biological Process	GO:0060271	cilium assembly	ccdc28b	IMP	ZFIN:ZDB-CRISPR-180710-10,ZFIN:ZDB-CRISPR-180710-9	Zfish	PMID:29445114

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern