Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCDC136
  • Mouse genes Ccdc136
  • Rat genes Ccdc136
  • Zfish genes ccdc136b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccdc136

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0002080	acrosomal membrane	Ccdc136	IMP		Mouse	MGI:MGI:5816406|PMID:27076447
Cellular Component	GO:0005737	cytoplasm	ccdc136b	IDA		Zfish	PMID:27477027
Cellular Component	GO:0005739	mitochondrion	Ccdc136	HDA		Mouse	PMID:18614015
Biological Process	GO:0001675	acrosome assembly	Ccdc136	IMP		Mouse	MGI:MGI:5816406|PMID:27076447
Biological Process	GO:2000054	negative regulation of Wnt signaling pathway involved in dorsal/ventral axis specification	ccdc136b	IMP	ZFIN:ZDB-MRPHLNO-161019-1	Zfish	PMID:27477027
Biological Process	GO:0007338	single fertilization	Ccdc136	IMP		Mouse	MGI:MGI:5816406|PMID:27076447
Biological Process	GO:0007283	spermatogenesis	Ccdc136	IMP		Mouse	MGI:MGI:5816406|PMID:27076447

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern