Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CBX6
  • Mouse genes Cbx6
  • Rat genes Cbx6
  • Zfish genes cbx6a,cbx6b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cbx6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:Q99496	Human	PMID:18927235
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:Q9HCE1	Human	PMID:20543829
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:P35226	Human	PMID:20601937
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:P35226	Human	PMID:21282530
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:P35227	Human	PMID:21282530
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:Q06587	Human	PMID:21282530
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:Q3KNV8	Human	PMID:21282530
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:Q99496	Human	PMID:21282530
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:Q9HCE1	Human	PMID:21282530
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:P35226	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:Q06587	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:Q99496	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:P35226	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:P35227	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:Q06587	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:Q99496	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:P35227	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CBX6	IPI	UniProtKB:P35226	Human	PMID:34316702
Molecular Function	GO:0003727	single-stranded RNA binding	Cbx6	IDA		Mouse	MGI:MGI:3619779|PMID:16537902
Cellular Component	GO:0000792	heterochromatin	Cbx6	IDA		Mouse	MGI:MGI:3619779|PMID:16537902
Cellular Component	GO:0016604	nuclear body	CBX6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	CBX6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CBX6	IDA		Human	PMID:21282530
Cellular Component	GO:0005634	nucleus	Cbx6	IDA		Mouse	MGI:MGI:3619779|PMID:16537902
Cellular Component	GO:0031519	PcG protein complex	CBX6	IDA		Human	PMID:21282530
Biological Process	GO:0002244	hematopoietic progenitor cell differentiation	cbx6b	IMP		Zfish	PMID:24240475
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	CBX6	IMP		Human	PMID:21282530

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern