Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CAPRIN2
  • Mouse genes Caprin2
  • Rat genes Caprin2
  • Zfish genes caprin2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Caprin2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CAPRIN2	IPI	UniProtKB:O75197	Human	PMID:18762581
Molecular Function	GO:0005515	protein binding	CAPRIN2	IPI	UniProtKB:P50542	Human	PMID:25416956
Molecular Function	GO:0005102	signaling receptor binding	CAPRIN2	IPI	UniProtKB:O75197	Human	PMID:18762581
Molecular Function	GO:0005102	signaling receptor binding	CAPRIN2	IPI	UniProtKB:O75581	Human	PMID:18762581
Cellular Component	GO:0005813	centrosome	CAPRIN2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005737	cytoplasm	CAPRIN2	IDA		Human	PMID:14593112
Cellular Component	GO:0005829	cytosol	CAPRIN2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	CAPRIN2	IDA		Human	PMID:14593112
Cellular Component	GO:0005654	nucleoplasm	CAPRIN2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043235	receptor complex	CAPRIN2	IDA		Human	PMID:18762581
Biological Process	GO:0009953	dorsal/ventral pattern formation	caprin2	IMP	ZFIN:ZDB-MRPHLNO-090103-2	Zfish	PMID:18762581
Biological Process	GO:0009953	dorsal/ventral pattern formation	caprin2	IMP	ZFIN:ZDB-MRPHLNO-090103-1	Zfish	PMID:18762581
Biological Process	GO:0030308	negative regulation of cell growth	CAPRIN2	IDA		Human	PMID:14593112
Biological Process	GO:0090263	positive regulation of canonical Wnt signaling pathway	CAPRIN2	IDA		Human	PMID:18762581
Biological Process	GO:0090263	positive regulation of canonical Wnt signaling pathway	caprin2	IMP		Zfish	PMID:18762581|ZFIN:ZDB-PUB-080908-2
Biological Process	GO:0050775	positive regulation of dendrite morphogenesis	Caprin2	IMP		Mouse	MGI:MGI:4888105|PMID:20516077
Biological Process	GO:0061003	positive regulation of dendritic spine morphogenesis	Caprin2	IMP		Mouse	MGI:MGI:4888105|PMID:20516077
Biological Process	GO:0033138	positive regulation of peptidyl-serine phosphorylation	CAPRIN2	IDA		Human	PMID:18762581
Biological Process	GO:0032092	positive regulation of protein binding	CAPRIN2	IDA		Human	PMID:18762581
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	CAPRIN2	IDA		Human	PMID:18762581
Biological Process	GO:0030177	positive regulation of Wnt signaling pathway	caprin2	IMP	ZFIN:ZDB-MRPHLNO-090103-1	Zfish	PMID:18762581
Biological Process	GO:0030177	positive regulation of Wnt signaling pathway	caprin2	IMP	ZFIN:ZDB-MRPHLNO-090103-2	Zfish	PMID:18762581
Biological Process	GO:2000055	positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification	caprin2	IMP		Zfish	PMID:18762581|ZFIN:ZDB-PUB-080908-2

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern