Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CACNA2D4
  • Mouse genes Cacna2d4
  • Rat genes Cacna2d4
  • Zfish genes cacna2d4a,cacna2d4b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cacna2d4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005245	voltage-gated calcium channel activity	CACNA2D4	IDA		Human	PMID:12181424
Cellular Component	GO:0005891	voltage-gated calcium channel complex	CACNA2D4	IDA		Human	PMID:12181424
Biological Process	GO:0070588	calcium ion transmembrane transport	CACNA2D4	IDA		Human	PMID:12181424
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	CACNA2D4	IMP		Human	PMID:17033974
Biological Process	GO:0046549	retinal cone cell development	cacna2d4a	IGI	ZFIN:ZDB-GENO-200723-7	Zfish	PMID:31834350
Biological Process	GO:0046549	retinal cone cell development	cacna2d4b	IGI	ZFIN:ZDB-GENO-200723-7	Zfish	PMID:31834350

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern