Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CABIN1
  • Mouse genes Cabin1
  • Rat genes Cabin1
  • Zfish genes cabin1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cabin1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CABIN1	IPI	UniProtKB:Q02080	Human	PMID:12700764
Molecular Function	GO:0005515	protein binding	CABIN1	IPI	UniProtKB:Q02080	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	Cabin1	IPI	RGD:620274|RGD:71096	Rat	PMID:10931822|RGD:10054396
Molecular Function	GO:0019904	protein domain specific binding	Cabin1	IMP		Rat	PMID:12114545|RGD:625401
Molecular Function	GO:0030346	protein phosphatase 2B binding	Cabin1	IDA		Rat	PMID:9660798|RGD:632368
Cellular Component	GO:0016235	aggresome	CABIN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	CABIN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	CABIN1	IDA		Human	GO_REF:0000052
Biological Process	GO:0043066	negative regulation of apoptotic process	Cabin1	IMP		Rat	PMID:12114545|RGD:625401
Biological Process	GO:0006334	nucleosome assembly	CABIN1	IDA		Human	PMID:14718166
Biological Process	GO:0014823	response to activity	Cabin1	IEP		Rat	PMID:16266368|RGD:10054393

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern