Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BICRA
  • Mouse genes Bicra
  • Rat genes Bicra
  • Zfish genes bicra
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bicra

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	BICRA	IPI	UniProtKB:P16333	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	BICRA	IPI	UniProtKB:P46108	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	BICRA	IPI	UniProtKB:O60885	Human	PMID:21555454
Molecular Function	GO:0005515	protein binding	BICRA	IPI	UniProtKB:O60885	Human	PMID:29374058
Molecular Function	GO:0005515	protein binding	BICRA	IPI	UniProtKB:P46108	Human	PMID:35044719
Molecular Function	GO:0140537	transcription regulator activator activity	BICRA	IMP		Human	PMID:21555454
Cellular Component	GO:0005634	nucleus	BICRA	IMP		Human	PMID:21555454
Cellular Component	GO:0016514	SWI/SNF complex	BICRA	IDA		Human	PMID:29374058
Cellular Component	GO:0016514	SWI/SNF complex	Bicra	IDA		Mouse	MGI:MGI:6157116|PMID:29374058
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	bicra	IMP	ZFIN:ZDB-GENO-220613-5	Zfish	PMID:33232675
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	BICRA	IMP		Human	PMID:21555454

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern