Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BCDIN3D
  • Mouse genes Bcdin3d
  • Rat genes Bcdin3d
  • Zfish genes bcdin3d
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bcdin3d

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008171	O-methyltransferase activity	BCDIN3D	EXP		Human	PMID:23063121
Molecular Function	GO:0070883	pre-miRNA binding	BCDIN3D	IDA		Human	PMID:33664453
Molecular Function	GO:0005515	protein binding	BCDIN3D	IPI	UniProtKB:Q6ZN57	Human	PMID:25416956
Molecular Function	GO:0008173	RNA methyltransferase activity	BCDIN3D	IDA		Human	PMID:23063121
Molecular Function	GO:0008173	RNA methyltransferase activity	BCDIN3D	IDA		Human	PMID:33664453
Molecular Function	GO:0090486	small RNA 2'-O-methyltransferase activity	BCDIN3D	IDA		Human	PMID:23063121
Molecular Function	GO:0008175	tRNA methyltransferase activity	BCDIN3D	IDA		Human	PMID:28119416
Molecular Function	GO:0008175	tRNA methyltransferase activity	BCDIN3D	IDA		Human	PMID:31919512
Cellular Component	GO:0005737	cytoplasm	BCDIN3D	IDA		Human	PMID:23063121
Cellular Component	GO:0005829	cytosol	BCDIN3D	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	BCDIN3D	IDA		Human	GO_REF:0000052
Biological Process	GO:2000632	negative regulation of pre-miRNA processing	BCDIN3D	IDA		Human	PMID:23063121
Biological Process	GO:0031054	pre-miRNA processing	BCDIN3D	IDA		Human	PMID:33664453
Biological Process	GO:0001510	RNA methylation	BCDIN3D	IDA		Human	PMID:33664453
Biological Process	GO:0030488	tRNA methylation	BCDIN3D	IDA		Human	PMID:28119416
Biological Process	GO:0030488	tRNA methylation	BCDIN3D	IDA		Human	PMID:31919512

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern