Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes C9orf78
  • Mouse genes BC005624
  • Rat genes C3h9orf78
  • Zfish genes zgc:103692
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set BC005624

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	C9orf78	IPI	UniProtKB:Q9NYB0	Human	PMID:21044950
Molecular Function	GO:0005515	protein binding	C9orf78	IPI	UniProtKB:O75643	Human	PMID:35241646
Molecular Function	GO:0030623	U5 snRNA binding	C9orf78	IDA		Human	PMID:35241646
Cellular Component	GO:0000775	chromosome, centromeric region	C9orf78	IDA		Human	PMID:35167828
Cellular Component	GO:0005829	cytosol	C9orf78	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	C9orf78	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	C9orf78	IDA		Human	PMID:35167828
Biological Process	GO:0045292	mRNA cis splicing, via spliceosome	C9orf78	IMP		Human	PMID:35241646
Biological Process	GO:0060629	regulation of homologous chromosome segregation	C9orf78	IMP		Human	PMID:35167828

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern