Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATP6V0D1
  • Mouse genes Atp6v0d1
  • Rat genes Atp6v0d1
  • Zfish genes atp6v0d1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atp6v0d1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:Q16864	Human	PMID:18752060
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:Q9Y5K8	Human	PMID:18752060
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:O75787	Human	PMID:20093472
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:Q86T03	Human	PMID:29644770
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:O75787	Human	PMID:30374053
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:Q9P0T7	Human	PMID:30374053
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:O43711	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:Q9NQL9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ATP6V0D1	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Atp6v0d1	IPI	UniProtKB:Q3TWL2	Mouse	MGI:MGI:6304515|PMID:29644770
Molecular Function	GO:0044877	protein-containing complex binding	Atp6v0d1	IPI	RGD:3949|RGD:3802	Rat	PMID:8567678|RGD:2301258
Molecular Function	GO:0046961	proton-transporting ATPase activity, rotational mechanism	Atp6v0d1	IDA		Mouse	PMID:12527205
Cellular Component	GO:0016324	apical plasma membrane	Atp6v0d1	IDA		Rat	PMID:16192400|RGD:1581809
Cellular Component	GO:0043679	axon terminus	Atp6v0d1	IDA		Rat	PMID:9753184|RGD:2301257
Cellular Component	GO:0005813	centrosome	ATP6V0D1	IDA		Human	PMID:21844891
Cellular Component	GO:0005769	early endosome	Atp6v0d1	IDA		Mouse	PMID:9670047
Cellular Component	GO:0070062	extracellular exosome	ATP6V0D1	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	ATP6V0D1	HDA		Human	PMID:19199708
Cellular Component	GO:0070062	extracellular exosome	ATP6V0D1	HDA		Human	PMID:23533145
Cellular Component	GO:0005765	lysosomal membrane	ATP6V0D1	HDA		Human	PMID:17897319
Cellular Component	GO:0016020	membrane	ATP6V0D1	IDA		Human	PMID:18752060
Cellular Component	GO:0043005	neuron projection	Atp6v0d1	IDA		Rat	PMID:8567678|RGD:2301258
Cellular Component	GO:0032991	protein-containing complex	Atp6v0d1	IDA		Rat	PMID:8567678|RGD:2301258
Cellular Component	GO:0033176	proton-transporting V-type ATPase complex	Atp6v0d1	IDA		Mouse	PMID:12963731
Cellular Component	GO:0033179	proton-transporting V-type ATPase, V0 domain	Atp6v0d1	IDA		Mouse	PMID:12963731
Cellular Component	GO:0008021	synaptic vesicle	Atp6v0d1	IDA		Rat	PMID:7961771|RGD:2301259
Cellular Component	GO:0030672	synaptic vesicle membrane	Atp6v0d1	EXP		Rat	PMID:32165585|RGD:39458019
Cellular Component	GO:0030672	synaptic vesicle membrane	Atp6v0d1	IDA		Rat	PMID:32165585|RGD:39458019
Cellular Component	GO:1902495	transmembrane transporter complex	Atp6v0d1	IDA		Mouse	PMID:12963731
Cellular Component	GO:0016471	vacuolar proton-transporting V-type ATPase complex	ATP6V0D1	IDA		Human	PMID:18752060
Biological Process	GO:0045176	apical protein localization	atp6v0d1	IMP	ZFIN:ZDB-GENO-210929-2	Zfish	PMID:32328632
Biological Process	GO:0007420	brain development	Atp6v0d1	IEP		Rat	PMID:9753184|RGD:2301257
Biological Process	GO:0036295	cellular response to increased oxygen levels	ATP6V0D1	IMP		Human	PMID:28296633
Biological Process	GO:0060271	cilium assembly	atp6v0d1	IMP		Zfish	PMID:21844891|ZFIN:ZDB-PUB-110817-6
Biological Process	GO:0060271	cilium assembly	atp6v0d1	IMP	ZFIN:ZDB-MRPHLNO-131126-9	Zfish	PMID:21844891
Biological Process	GO:0008057	eye pigment granule organization	atp6v0d1	IMP	ZFIN:ZDB-GENO-100518-5	Zfish	PMID:18836173
Biological Process	GO:0001947	heart looping	atp6v0d1	IMP	ZFIN:ZDB-MRPHLNO-131126-9	Zfish	PMID:21844891
Biological Process	GO:0001947	heart looping	atp6v0d1	IMP	ZFIN:ZDB-MRPHLNO-131126-10	Zfish	PMID:21844891
Biological Process	GO:0001947	heart looping	atp6v0d1	IGI	ZFIN:ZDB-MRPHLNO-131126-6,ZFIN:ZDB-MRPHLNO-131126-9	Zfish	PMID:21844891
Biological Process	GO:0006879	intracellular iron ion homeostasis	ATP6V0D1	IMP		Human	PMID:28296633
Biological Process	GO:0070986	left/right axis specification	atp6v0d1	IMP		Zfish	PMID:21844891|ZFIN:ZDB-PUB-110817-6
Biological Process	GO:0032438	melanosome organization	atp6v0d1	IMP	ZFIN:ZDB-GENO-100518-5	Zfish	PMID:18836173
Biological Process	GO:0035675	neuromast hair cell development	atp6v0d1	IMP	ZFIN:ZDB-MRPHLNO-131126-9	Zfish	PMID:21844891
Biological Process	GO:0039022	pronephric duct development	atp6v0d1	IMP	ZFIN:ZDB-MRPHLNO-131126-9	Zfish	PMID:21844891
Biological Process	GO:0046688	response to copper ion	atp6v0d1	IMP	ZFIN:ZDB-GENO-080825-1	Zfish	PMID:19008952
Biological Process	GO:0060041	retina development in camera-type eye	atp6v0d1	IMP	ZFIN:ZDB-GENO-040917-1	Zfish	PMID:15716491
Biological Process	GO:0003406	retinal pigment epithelium development	atp6v0d1	IMP	ZFIN:ZDB-GENO-100518-5	Zfish	PMID:18836173
Biological Process	GO:0097401	synaptic vesicle lumen acidification	Atp6v0d1	IDA		Mouse	PMID:28793259
Biological Process	GO:0097401	synaptic vesicle lumen acidification	Atp6v0d1	EXP		Mouse	PMID:28793259
Biological Process	GO:0097401	synaptic vesicle lumen acidification	Atp6v0d1	IMP		Mouse	PMID:28793259

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern