Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ARVCF
  • Mouse genes Arvcf
  • Rat genes Arvcf
  • Zfish genes arvcfa,arvcfb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Arvcf

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	ARVCF	IPI	UniProtKB:P12830	Human	PMID:10725230
Molecular Function	GO:0005515	protein binding	ARVCF	IPI	UniProtKB:Q68DX3	Human	PMID:19706687
Molecular Function	GO:0005515	protein binding	ARVCF	IPI	UniProtKB:P17844	Human	PMID:24644279
Molecular Function	GO:0005515	protein binding	ARVCF	IPI	UniProtKB:P55795	Human	PMID:24644279
Molecular Function	GO:0005515	protein binding	ARVCF	IPI	UniProtKB:Q07955	Human	PMID:24644279
Molecular Function	GO:0005515	protein binding	ARVCF	IPI	UniProtKB:Q15834	Human	PMID:25009281
Molecular Function	GO:0005515	protein binding	Arvcf	IPI	PR:P09803	Mouse	PMID:11058098
Molecular Function	GO:0005515	protein binding	Arvcf	IPI	PR:P33146	Mouse	PMID:11058098
Molecular Function	GO:0005515	protein binding	Arvcf	IPI	PR:P15116	Mouse	PMID:11719554
Cellular Component	GO:0005912	adherens junction	ARVCF	IDA		Human	PMID:10725230
Cellular Component	GO:0005912	adherens junction	ARVCF	IDA		Human	PMID:24644279
Cellular Component	GO:0005737	cytoplasm	ARVCF	IDA		Human	PMID:24644279
Cellular Component	GO:0005737	cytoplasm	Arvcf	IDA		Mouse	PMID:11719554
Cellular Component	GO:1990124	messenger ribonucleoprotein complex	ARVCF	IDA		Human	PMID:24644279
Cellular Component	GO:0005634	nucleus	ARVCF	IDA		Human	PMID:10725230
Cellular Component	GO:0005634	nucleus	ARVCF	IDA		Human	PMID:24644279
Cellular Component	GO:0005634	nucleus	Arvcf	IDA		Mouse	PMID:11058098
Cellular Component	GO:0005886	plasma membrane	Arvcf	IDA		Mouse	PMID:11058098
Biological Process	GO:0008380	RNA splicing	ARVCF	IMP		Human	PMID:24644279

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern