Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ARF5
  • Mouse genes Arf5
  • Rat genes Arf5
  • Zfish genes arf4a,arf5,zgc:77650
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Arf5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ARF5	IPI	UniProtKB:O75154	Human	PMID:17030804
Molecular Function	GO:0005515	protein binding	ARF5	IPI	UniProtKB:Q8N9I9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARF5	IPI	UniProtKB:Q96HD9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Arf5	IPI	UniProtKB:Q8BYR5	Mouse	MGI:MGI:5470054|PMID:22111578
Cellular Component	GO:0005737	cytoplasm	Arf5	IDA		Mouse	PMID:8947846
Cellular Component	GO:0070062	extracellular exosome	ARF5	HDA		Human	PMID:23533145
Cellular Component	GO:0005886	plasma membrane	Arf5	IDA		Mouse	PMID:8947846
Biological Process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	ARF5	IGI	UniProtKB:P18085	Human	PMID:24768165

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern