Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AP5B1
  • Mouse genes Ap5b1
  • Rat genes Ap5b1
  • Zfish genes ap5b1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ap5b1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	AP5B1	IPI	UniProtKB:O43299	Human	PMID:20613862
Molecular Function	GO:0005515	protein binding	AP5B1	IPI	UniProtKB:Q68DK2	Human	PMID:20613862
Molecular Function	GO:0005515	protein binding	AP5B1	IPI	UniProtKB:Q96JI7	Human	PMID:20613862
Molecular Function	GO:0005515	protein binding	AP5B1	IPI	UniProtKB:Q9NUS5	Human	PMID:20613862
Molecular Function	GO:0005515	protein binding	AP5B1	IPI	UniProtKB:Q9H0R1-1	Human	PMID:22022230
Molecular Function	GO:0005515	protein binding	AP5B1	IPI	UniProtKB:Q13554	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	AP5B1	IPI	UniProtKB:Q9GZT8	Human	PMID:25416956
Cellular Component	GO:0030119	AP-type membrane coat adaptor complex	AP5B1	IDA		Human	PMID:22022230
Cellular Component	GO:0005765	lysosomal membrane	AP5B1	HDA		Human	PMID:17897319
Biological Process	GO:0016197	endosomal transport	AP5B1	IMP		Human	PMID:22022230

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern