Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AP3M1
  • Mouse genes Ap3m1
  • Rat genes Ap3m1
  • Zfish genes ap3m1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ap3m1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q04671	Human	PMID:19116314
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q14194	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q6RW13	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q9C026	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q9P2F8-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q9UHP6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q96NE9-2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q9UHP6	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:P36406	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q14194	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q6RW13-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q8N0X2-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q92997	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q9HBZ2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q9P2F8-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q9UBH0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q9UHP6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:Q9UP95	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AP3M1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Ap3m1	IPI	UniProtKB:Q5M834	Rat	PMID:19428785|RGD:8554107
Molecular Function	GO:0031267	small GTPase binding	AP3M1	IPI	UniProtKB:P57729	Human	PMID:22511774
Molecular Function	GO:0031267	small GTPase binding	AP3M1	IPI	UniProtKB:Q13637	Human	PMID:22511774
Cellular Component	GO:0005765	lysosomal membrane	AP3M1	HDA		Human	PMID:17897319
Biological Process	GO:0008089	anterograde axonal transport	Ap3m1	IMP		Mouse	MGI:MGI:5437407|PMID:21998198
Biological Process	GO:0048490	anterograde synaptic vesicle transport	Ap3m1	IMP		Mouse	MGI:MGI:5437407|PMID:21998198

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern