Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AIDA
  • Mouse genes Aida
  • Rat genes Aida
  • Zfish genes aida
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Aida

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035091	phosphatidylinositol binding	aida	IDA		Zfish	PMID:25117763
Molecular Function	GO:0005515	protein binding	AIDA	IPI	UniProtKB:Q96BK5	Human	PMID:21900206
Molecular Function	GO:0005515	protein binding	AIDA	IPI	UniProtKB:Q8TBB1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	AIDA	IPI	UniProtKB:Q9NWS6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	AIDA	IPI	UniProtKB:P83881	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AIDA	IPI	UniProtKB:Q7Z589-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AIDA	IPI	UniProtKB:Q96BK5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AIDA	IPI	UniProtKB:Q96D03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AIDA	IPI	UniProtKB:Q9NWS6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AIDA	IPI	UniProtKB:Q9UJV9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Aida	IPI	UniProtKB:O35625	Mouse	MGI:MGI:3799599|PMID:17681137
Molecular Function	GO:0019904	protein domain specific binding	Aida	IPI	MGI:MGI:1096327	Mouse	PMID:17681137
Cellular Component	GO:0005737	cytoplasm	Aida	IDA		Mouse	PMID:17681137
Cellular Component	GO:0016020	membrane	aida	IDA		Zfish	PMID:25117763
Biological Process	GO:0048264	determination of ventral identity	aida	IMP	ZFIN:ZDB-MRPHLNO-071126-3	Zfish	PMID:17681137
Biological Process	GO:0048264	determination of ventral identity	aida	IDA		Zfish	PMID:17681137
Biological Process	GO:0009953	dorsal/ventral pattern formation	aida	IMP		Zfish	PMID:17681137|ZFIN:ZDB-PUB-070813-12
Biological Process	GO:2000016	negative regulation of determination of dorsal identity	aida	IDA		Zfish	PMID:17681137|ZFIN:ZDB-PUB-070813-12
Biological Process	GO:2000016	negative regulation of determination of dorsal identity	aida	IMP		Zfish	PMID:17681137|ZFIN:ZDB-PUB-070813-12
Biological Process	GO:0046329	negative regulation of JNK cascade	Aida	IMP		Mouse	MGI:MGI:3799599|PMID:17681137
Biological Process	GO:0046329	negative regulation of JNK cascade	Aida	IPI	UniProtKB:O35625	Mouse	MGI:MGI:3799599|PMID:17681137
Biological Process	GO:0046329	negative regulation of JNK cascade	aida	IDA		Zfish	PMID:17681137|ZFIN:ZDB-PUB-070813-12
Biological Process	GO:0046329	negative regulation of JNK cascade	aida	IMP		Zfish	PMID:17681137|ZFIN:ZDB-PUB-070813-12
Biological Process	GO:0043508	negative regulation of JUN kinase activity	AIDA	IDA		Human	PMID:17681137
Biological Process	GO:0043508	negative regulation of JUN kinase activity	Aida	IMP		Mouse	PMID:17681137
Biological Process	GO:0043508	negative regulation of JUN kinase activity	Aida	IDA		Mouse	PMID:17681137
Biological Process	GO:0043508	negative regulation of JUN kinase activity	aida	IDA		Zfish	PMID:17681137|ZFIN:ZDB-PUB-070813-12
Biological Process	GO:0031333	negative regulation of protein-containing complex assembly	Aida	IMP		Mouse	MGI:MGI:3799599|PMID:17681137
Biological Process	GO:0043254	regulation of protein-containing complex assembly	Aida	IMP		Mouse	PMID:17681137

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern