Gene Expression Literature Summary

• Symbol: Tsix
• Name: X (inactive)-specific transcript, opposite strand
• ID: MGI:1336196

13 matching records from 13 references.

Summary by Age and Assay: Numbers in the table indicate the number of results matching the search criteria.

Age	E0.5	E1	E1.5	E2	E2.5	E3	E3.5	E4	E4.5	E5	E5.5	E6.5	E12.5	E13.5	E14	E16	E18	E18.5	P
In situ RNA (section)							2	1	1	1	2	1			1	1	1		1
In situ RNA (whole mount)				1	2	2	2	1											1
RT-PCR	2	2	1	2	2	1	3	1	1		1		1	2				1	5

Summary by Gene and Reference: Number indicates the number of results matching the search criteria recorded for each reference.
* Indicates detailed expression data entries available

Tsix  X (inactive)-specific transcript, opposite strand
Results	Reference
4*	J:93300 Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL, Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
10	J:226026 Deuve JL, Bonnet-Garnier A, Beaujean N, Avner P, Morey C, Antagonist Xist and Tsix co-transcription during mouse oogenesis and maternal Xist expression during pre-implantation development calls into question the nature of the maternal imprint on the X chromosome. Epigenetics. 2015 Oct 3;10(10):931-42
1	J:267576 Gontan C, Mira-Bontenbal H, Magaraki A, Dupont C, Barakat TS, Rentmeester E, Demmers J, Gribnau J, REX1 is the critical target of RNF12 in imprinted X chromosome inactivation in mice. Nat Commun. 2018 Nov 12;9(1):4752
5	J:99563 Jeong KS, Park JH, Lee S, The analysis of X-chromosome inactivation-related gene expression from single mouse embryo with sex-determination. Biochem Biophys Res Commun. 2005 Aug 5;333(3):803-7
3	J:169234 Kim JD, Kim H, Ekram MB, Yu S, Faulk C, Kim J, Rex1/Zfp42 as an epigenetic regulator for genomic imprinting. Hum Mol Genet. 2011 Apr 1;20(7):1353-62
3	J:70372 Matsui J, Goto Y, Takagi N, Control of Xist expression for imprinted and random X chromosome inactivation in mice. Hum Mol Genet. 2001 Jun 15;10(13):1393-401
4*	J:55015 Mise N, Goto Y, Nakajima N, Takagi N, Molecular cloning of antisense transcripts of the mouse Xist gene. Biochem Biophys Res Commun. 1999 May 19;258(3):537-41
2	J:130425 Ohhata T, Hoki Y, Sasaki H, Sado T, Crucial role of antisense transcription across the Xist promoter in Tsix-mediated Xist chromatin modification. Development. 2008 Jan;135(2):227-35
1*	J:99399 Sado T, Hoki Y, Sasaki H, Tsix Silences Xist through Modification of Chromatin Structure. Dev Cell. 2005 Jul;9(1):159-165
2*	J:297196 Sado T, Hoki Y, Sasaki H, Tsix defective in splicing is competent to establish Xist silencing. Development. 2006;133(24):4925-31
2	J:324716 Samanta MK, Gayen S, Harris C, Maclary E, Murata-Nakamura Y, Malcore RM, Porter RS, Garay PM, Vallianatos CN, Samollow PB, Iwase S, Kalantry S, Activation of Xist by an evolutionarily conserved function of KDM5C demethylase. Nat Commun. 2022 May 11;13(1):2602
6*	J:275903 Shiura H, Abe K, Xist/Tsix expression dynamics during mouse peri-implantation development revealed by whole-mount 3D RNA-FISH. Sci Rep. 2019 Mar 6;9(1):3637
3	J:171449 Williams LH, Kalantry S, Starmer J, Magnuson T, Transcription precedes loss of Xist coating and depletion of H3K27me3 during X-chromosome reprogramming in the mouse inner cell mass. Development. 2011 May;138(10):2049-57