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Gene Expression Data
Assay Details
Assay
Reference: J:184876 Chiara F, et al., Early B-cell factors 2 and 3 (EBF2/3) regulate early migration of Cajal-Retzius cells from the cortical hem. Dev Biol. 2012 May 1;365(1):277-89
Assay type: RNA in situ
MGI Accession ID: MGI:8240087
Gene symbol: Ebf2
Gene name: early B cell factor 2
Probe: Ebf2 probe
Probe preparation: labelled with digoxigenin RNA
Results
Specimen 1A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon Present Regionally restricted 1A Expression first detected in preplate and cortical hem.sion
TS17: cortical hem Present 1A

Specimen 1B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cortical preplate Present 1B
TS20: cortical hem Present 1B
TS20: lateral ventricle choroid plexus Absent 1B
TS20: ventral pallium Present Regionally restricted 1B Expression extended to piriform cortex, part of mantle zone of ventral pallium.

Specimen E13.5 not shown: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: telencephalon septum Present

Specimen 1C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: cortical hem Present 1C
TS21: cortical preplate Present 1C
TS21: telencephalon marginal layer Present 1C Expression in marginal zone
TS21: cortical subplate Present 1C
TS21: lateral ventricle choroid plexus Absent 1C

Specimen 1E/F: embryonic day 12.5 (more )
Note: Double labeled: blue - Ebf2 and Reln.
Structure Level Pattern Image Note
TS20: cortical preplate Present 1E , 1F
TS20: cortical hem Present 1F , 1E
TS20: lateral ventricle choroid plexus Absent 1E , 1F

Specimen 1H: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon septum Present 1H

Specimen 1I: embryonic day 12.5 (more )
Note: Double labeled: blue - Ebf2 and Reln.
Structure Level Pattern Image Note
TS20: telencephalon Present Regionally restricted 1I Expression in piriform cortex, not co-localized with Reln expression.

Specimen 1J: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical hem Weak Regionally restricted 1J Expression dowregulated in pallial regions from E15.5
TS23: telencephalon marginal layer Weak Regionally restricted 1J Expression dowregulated in pallial regions from E15.5
TS23: amygdala Present 1J Expression persists in piriform cortex and subcortical nuclei.
TS23: piriform cortex Present 1J Expression persists in piriform cortex and subcortical nuclei.
TS23: lateral ventricle choroid plexus Absent 1J

Specimen 1K: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: telencephalon marginal layer Weak Regionally restricted 1K Expression dowregulated in palial regions from E15.5
TS25: amygdala Present 1K Expression persists in amygdala.

Specimen 1L: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: bed nucleus of stria terminalis Present 1L Expression only detected in zona incerta and bed nucleus of stria terminalis.
TS27: zona incerta Present 1L Expression only detected in zona incerta and bed nucleus of stria terminalis.

Specimen 5B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cortical hem Present Regionally restricted 5B Expression restricted to subdomain in cortical hem.

Specimen 5B': embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cortical hem Ambiguous 5B'

Specimen 5E: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon septum Present Regionally restricted 5E Expression in septum confined dorsally.

Specimen 5H: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical hem Ambiguous Regionally restricted 5H Expression downregulated in marginal zone and cortical hem.
TS23: telencephalon marginal layer Ambiguous Regionally restricted 5H Expression downregulated in marginal zone and cortical hem.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/06/2026
MGI 6.29
The Jackson Laboratory