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Gene Expression Data
Assay Details
Assay
Reference: J:314576 Narayanan R, et al., Loss of BAF (mSWI/SNF) Complexes Causes Global Transcriptional and Chromatin State Changes in Forebrain Development. Cell Rep. 2015 Dec 1;13(9):1842-54
Assay type: Immunohistochemistry
MGI Accession ID: MGI:8226102
Gene symbol: Smarcd1
Gene name: SWI/SNF related BAF chromatin remodeling complex subunit D1
Antibody: Anti-BAF60a
Detection system: Secondary antibody coupled to Alexa Fluor 488
Results
Specimen S3A Control: embryonic day 12.5 (more )
Note: Heterozygous animals (BAF155fl/+, BAF170fl/+, Cre) were used as controls.
Structure Level Pattern Image Note
TS20: cerebral cortex Present S3A Control - BAF60a
Specimen S3A dcKO_Emx1-Cre: embryonic day 12.5; Smarcc1tm2.1Rhs/Smarcc1tm2.1Rhs, Smarcc2tm1.1Stoy/Smarcc2tm1.1Stoy, Emx1tm1(cre)Krj/Emx1+ (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS20: cerebral cortex Weak S3A dcKO_Emc1-Cre - BAF60a Expression was reduced at E12.5 in cortical tissue of dcKO_Emx1-Cre mutants.
Specimen S3G Control: embryonic day 16.5 (more )
Note: Heterozygous animals (BAF155fl/+, BAF170fl/+, Cre) were used as controls.
Structure Level Pattern Image Note
TS24: cerebral cortex Present S3G Control - boxed area - BAFBAF60a , S3G Control - BAFBAF60a
Specimen S3G dcKO_Emx1-Cre: embryonic day 16.5; Smarcc1tm2.1Rhs/Smarcc1tm2.1Rhs, Smarcc2tm1.1Stoy/Smarcc2tm1.1Stoy, Emx1tm1(cre)Krj/Emx1+ (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS24: cerebral cortex Ambiguous S3G dcKO_Emc1-Cre - BAFBAF60a , S3G dcKO_Emc1-Cre - boxed area - BAFBAF60a Expression was largely absent at E16.5 in cortical tissue of dcKO_Emx1-Cre mutants.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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08/05/2025
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