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Gene Expression Data
Assay Details
Assay
Reference: J:245758 Carreno G, et al., Hypothalamic sonic hedgehog is required for cell specification and proliferation of LHX3/LHX4 pituitary embryonic precursors. Development. 2017 Sep 15;144(18):3289-3302
Assay type: Immunohistochemistry
MGI Accession ID: MGI:8169398
Gene symbol: Shh
Gene name: sonic hedgehog
Results
Specimen 1G: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: diencephalon Strong Regionally restricted 1G Expression was strongly detected in anterior hypothalamus.
TS15: branchial arch endoderm Strong Regionally restricted 1G Expression was strongly detected in pharyngeal endoderm.
TS15: Rathke's pouch Weak Regionally restricted 1G Weak signal was observed in the anterior part of Rathke's pouch epithelium.
TS15: oral region ectoderm Weak 1G

Specimen 1H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: diencephalon Strong Regionally restricted 1H Expression was strongly detected in anterior hypothalamus.
TS17: branchial arch endoderm Strong Regionally restricted 1H Expression was strongly detected in pharyngeal endoderm.
TS17: Rathke's pouch Weak Regionally restricted 1H Weak signal was observed in the anterior part of Rathke's pouch epithelium.
TS17: oral region ectoderm Weak 1H

Specimen 1I: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present 1I

Specimen 1J: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: hypothalamus Present 1J

Specimen 1K: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hypothalamus Present 1K

Specimen 1L: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: adenohypophysis Present Single cells 1L

Specimen 4C: embryonic day 9.5; Hesx1tm1(cre)Jpmb/Hesx1+, Shhtm2Amc/Shh+ (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS15: diencephalon Present Regionally restricted 4C Expression is detected in the anterior and posterior hypothalamus in the control embryos.

Specimen 4D: embryonic day 9.5; Hesx1tm1(cre)Jpmb/Hesx1+, Shhtm2Amc/Shhtm2.1Amc (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS15: diencephalon Strong Regionally restricted 4D Expression was lost in the anterior hypothalamus, but strong signal was detected in posterior hypothalamus of the mutant embryos.

Specimen 4G: embryonic day 10.5; Hesx1tm1(cre)Jpmb/Hesx1+, Shhtm2Amc/Shh+ (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS17: diencephalon Present Regionally restricted 4G Expression is detected in the anterior and posterior hypothalamus in the control embryos.
TS17: Rathke's pouch Absent 4G
TS17: branchial arch endoderm Present 4G

Specimen 4H: embryonic day 10.5; Hesx1tm1(cre)Jpmb/Hesx1+, Shhtm2Amc/Shhtm2.1Amc (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS17: diencephalon Present Regionally restricted 4H Expression was lost in the anterior hypothalamus, but signal was detected in posterior hypothalamus of the mutant embryos.
TS17: Rathke's pouch Present Regionally restricted 4H There is ectopic staining in the posterior region of the developing Rathke's pouch adjacent to the pharyngeal endoderm in the mutant.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
01/06/2026
MGI 6.24
The Jackson Laboratory