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Gene Expression Data
Assay Details
Assay
Reference: J:354852 Singh K, et al., The IgLON family of cell adhesion molecules expressed in developing neural circuits ensure the proper functioning of the sensory system in mice. Sci Rep. 2024 Sep 30;14(1):22593
Assay type: RNA in situ
MGI Accession ID: MGI:7863263
Gene symbol: Negr1
Gene name: neuronal growth regulator 1
Probe: Negr1 probe
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: central nervous system Present Widespread 1C Highly expressed throughout developing central nervous system, including telencephalic vesicles, diencephalon, mesencephalon, metencephalon, myelencephalon and spinal cord.
TS20: trigeminal ganglion Weak 1C Expression within trigeminal (V) nerve pathway.
TS20: facial ganglion Weak 1C Expression in facio-acoustic ganglion (VII/VIII) complex.
TS20: vestibulo-cochlear ganglion Weak 1C Expression in facio-acoustic ganglion (VII/VIII) complex.
TS20: inferior vagus ganglion Weak 1C Expression in nodose (X) ganglion.
TS20: inner ear vestibular component Present Regionally restricted 1C Expression particularly strong in dorsally located vestibular region. Expression in semicircular duct.
TS20: mandibular process Present Regionally restricted 1C Expression in maxillary and mandibular regions.
TS20: maxillary process Present Regionally restricted 1C Expression in maxillary and mandibular regions.
TS20: vibrissa follicle Present 1C Expression in whisker follicles..
TS20: nose Weak Regionally restricted 1C Expression in nostrils
TS20: forelimb interdigital region mesenchyme Present Regionally restricted 1C
TS20: hindlimb Present Regionally restricted 1C Expression in anterior region and small structural subunits of hindlimb.

Specimen 1C': embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: trigeminal ganglion Weak 1C' Expression within trigeminal (V) nerve pathway.
TS20: facial ganglion Weak 1C' Expression in facio-acoustic ganglion (VII/VIII) complex.
TS20: vestibulo-cochlear ganglion Weak 1C' Expression in facio-acoustic ganglion (VII/VIII) complex.
TS20: inferior vagus ganglion Weak 1C' Expression in nodose (X) ganglion.
TS20: skeletal muscle Present Regionally restricted 1C' Expression in orbicularis occuli muscle.
TS20: inner ear vestibular component Present Regionally restricted 1C' Expression particularly strong in dorsally located vestibular region. Expression in semicircular duct.
TS20: vibrissa follicle Present 1C' Expression in whisker follicles..
TS20: nose Weak Regionally restricted 1C' Expression in nostrils

Specimen 1C'': embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forelimb interdigital region mesenchyme Present 1C''
TS20: hindlimb Present Regionally restricted 1C'' Expression in anterior region and small structural subunits of hindlimb.
TS20: mammary bud Present 1C'' Specifically expressed within mammary bud.

Specimen 1J: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord Present Regionally restricted 1J Robust bilateral expression throughout lateral sides of spinal cord.
TS20: spinal cord roof plate Present 1J Expression specifically marked roof plate region of spinal cord.
TS20: dorsal root ganglion Present Widespread 1J Expression thoughout dorsal root ganglia.
TS20: brachial plexus Present 1J Expression in presumptive brachial and lumbosacral plexuses or in adjacent developing skeleton.
TS20: lumbosacral plexus Present 1J Expression in presumptive brachial and lumbosacral plexuses or in adjacent developing skeleton.

Specimen E12.5 not shown: embryonic day 12.5 (more )
Note: Data presented in Table 1.
Structure Level Pattern Image Note
TS20: rib pre-cartilage condensation Present Expression in developing rib.

Specimen 2C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: central nervous system Present Widespread 2C Highly expressed throughout developing central nervous system, including telencephalic vesicles, diencephalon, mesencephalon, metencephalon, myelencephalon and spinal cord.
TS21: naris Present 2C Expression in nostrils.
TS21: limb interdigital region mesenchyme Present 2C

Specimen 2C': embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: lens Weak Regionally restricted 2C' Weak expression in peripheral area of lens.
TS21: eye muscle Present Regionally restricted 2C' Expression in orbicularis oculi muscles.
TS21: vibrissa follicle Present Regionally restricted 2C' Expression in whisker follicles distally.

Specimen 2C'': embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: limb interdigital region mesenchyme Present 2C''
TS21: mammary bud Present Regionally restricted 2C'' Specifically expressed within mammary bud.

Specimen 2J: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: spinal cord roof plate Present 2J Expression specifically marked roof plate region of spinal cord.
TS21: dorsal root ganglion Present Widespread 2J Expression thoughout dorsal root ganglia.
TS21: brachial plexus Present 2J Expression in presumptive brachial and lumbosacral plexuses or in adjacent developing skeleton.
TS21: lumbosacral plexus Present 2J Expression in presumptive brachial and lumbosacral plexuses or in adjacent developing skeleton.

Specimen E13.5 not shown: embryonic day 13.5 (more )
Note: Data presented in Table 1.
Structure Level Pattern Image Note
TS21: olfactory lobe Present
TS21: spinal cord Present Regionally restricted Expression throughout lateral sides of spinal cord.
TS21: ear Weak
TS21: tail Present Expression in tailbud region

Specimen 3A: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: forelimb interdigital region mesenchyme Present 3A High expression in forelimb and hindlimb interdigital mesenchyme, whisker follicles, dorsal root ganglia, spinal cord, and in caudal extremity of neural tube and tail bud.

Specimen 3B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: central nervous system Present 3B High expression in forelimb and hindlimb interdigital mesenchyme, whisker follicles, dorsal root ganglia, spinal cord, and in caudal extremity of neural tube and tail bud.
TS21: dorsal root ganglion Present 3B High expression in forelimb and hindlimb interdigital mesenchyme, whisker follicles, dorsal root ganglia, spinal cord, and in caudal extremity of neural tube and tail bud.
TS21: forelimb interdigital region mesenchyme Present 3B High expression in forelimb and hindlimb interdigital mesenchyme, whisker follicles, dorsal root ganglia, spinal cord, and in caudal extremity of neural tube and tail bud.
TS21: hindlimb interdigital region mesenchyme Present 3B High expression in forelimb and hindlimb interdigital mesenchyme, whisker follicles, dorsal root ganglia, spinal cord, and in caudal extremity of neural tube and tail bud.
TS21: tail Present 3B High expression in forelimb and hindlimb interdigital mesenchyme, whisker follicles, dorsal root ganglia, spinal cord, and in caudal extremity of neural tube and tail bud.

Specimen 3C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: tail Present 3C High expression in forelimb and hindlimb interdigital mesenchyme, whisker follicles, dorsal root ganglia, spinal cord, and in caudal extremity of neural tube and tail bud.
TS21: vibrissa follicle Present 3C High expression in forelimb and hindlimb interdigital mesenchyme, whisker follicles, dorsal root ganglia, spinal cord, and in caudal extremity of neural tube and tail bud.

Specimen 5C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: vibrissa follicle Present Regionally restricted 5C Expression near whisker follicular areas.
TS20: limb Present 5C Expression at developing limbs.
TS20: inner ear vestibular component Present Regionally restricted 5C Expression in semicircular duct area.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory