Gene Expression Data
Assay Details
Assay
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Reference:
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J:245876
Rohacek AM, et al., ESRP1 Mutations Cause Hearing Loss due to Defects in Alternative Splicing that Disrupt Cochlear Development. Dev Cell. 2017 Nov 06;43(3):318-331.e5
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Assay type:
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Immunohistochemistry
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MGI Accession ID:
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MGI:7857189
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Gene symbol:
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Sox2
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Gene name:
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SRY (sex determining region Y)-box 2
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Results
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Specimen
S4A:
embryonic day 18.5
(more )
Note: Apex of cochlea. Double labeled: green - Sox2; red - Myo7a (assay MGI:7857188).
Specimen
S4A:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
|
Embedding:
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Cryosection
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Note:
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Apex of cochlea. Double labeled: green - Sox2; red - Myo7a (assay MGI:7857188).
|
Structure |
Level |
Pattern |
Image |
Note |
TS26: cochlear duct |
Present |
Regionally restricted |
S4A
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Expression in sensory progenitors.
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Specimen
S4B:
(close )
Genetic Background:
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involves: 129S4/SvJae * C57BL/6
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Mutant Allele(s):
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Esrp1tm1.2Rpc/Esrp1tm1.2Rpc
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Apex of cochlea. Double labeled: green - Sox2; red - Myo7a (assay MGI:7857188).
|
Structure |
Level |
Pattern |
Image |
Note |
TS26: cochlear duct |
Present |
|
S4B
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Sensory progenitors present in requisite number at apex of cochlear duct.
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Specimen
S4D:
embryonic day 18.5
(more )
Note: Base of cochlea. Double labeled: green - Sox2; red - Myo7a (assay MGI:7857188).
Specimen
S4D:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Base of cochlea. Double labeled: green - Sox2; red - Myo7a (assay MGI:7857188).
|
Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
TS26: cochlear duct |
supporting cell of cochlea |
Present |
|
S4D
|
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Specimen
S4E:
(close )
Genetic Background:
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involves: 129S4/SvJae * C57BL/6
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Mutant Allele(s):
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Esrp1tm1.2Rpc/Esrp1tm1.2Rpc
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Age:
|
embryonic day 18.5
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Sex:
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Not Specified
|
Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Base of cochlea. Double labeled: green - Sox2; red - Myo7a (assay MGI:7857188).
|
Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
TS26: cochlear duct |
supporting cell of cochlea |
Present |
|
S4E
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Similar number and organization of support cells (pillar and Deiter cells) at basal turn compared to control.
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Specimen
S4L:
embryonic day 14.5
(more )
Specimen
S4L:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: cochlear duct |
Present |
Regionally restricted |
S4L
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Expression in sensory progenitors.
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Specimen
S4M:
(close )
Genetic Background:
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involves: 129S4/SvJae * C57BL/6
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Mutant Allele(s):
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Esrp1tm1.2Rpc/Esrp1tm1.2Rpc
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Age:
|
embryonic day 14.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: cochlear duct |
Present |
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S4M
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No difference in expression in sensory progenitors compared to control.
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Specimen
4T/U:
postnatal day 0
(more )
Note: Double labeled: green - Sox2; red - Myo7a (assay MGI:7857188).
Specimen
4T/U:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 0
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Sex:
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Not Specified
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Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: green - Sox2; red - Myo7a (assay MGI:7857188).
|
Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
TS27: organ of Corti |
cochlea auditory hair cell |
Weak |
|
4U
,
4T
|
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Specimen
4W/X:
(close )
Genetic Background:
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involves: 129S4/SvJae * C57BL/6
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Mutant Allele(s):
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Esrp1tm1.2Rpc/Esrp1tm1.2Rpc
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Age:
|
postnatal day 0
|
Sex:
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Not Specified
|
Type:
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section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: green - Sox2; red - Myo7a (assay MGI:7857188).
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: organ of Corti |
Present |
Regionally restricted |
4X
,
4W
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Authors report failure to downregulated expression in hair cell nuclei.
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