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Gene Expression Data
Assay Details
Assay
Reference: J:171050 Thiagarajan RD, et al., Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways. PLoS One. 2011;6(2):e17286
Assay type: RNA in situ
MGI Accession ID: MGI:7840421
Gene symbol: Slc6a20b
Gene name: solute carrier family 6 (neurotransmitter transporter), member 20B
Probe: RIKEN clone F520006C14 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Authors described this gene as an 'anchor gene', which was defined as "genes whose expression is absolutely specific to a given anatomical compartment and/or developmental stage" in mouse kidney development.
Results
Specimen Supplementary Table 1: embryonic day 15.5 (more )
Note: Includes data from diagram in figure 5B.
Structure Level Pattern Image Note
TS23: cortical early proximal tubule Present Section in situ hybridization confirmed specific expression in early proximal tubule. Validated anchor gene. Expression was restricted to early proximal tubule of stage IV tubules.
Specimen not shown: postnatal adult (more )
Note: Data from diagram in figure 5B.
Structure Level Pattern Image Note
TS28: proximal straight tubule Present
TS28: segment 2 of proximal tubule Weak
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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