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Gene Expression Data
Assay Details
Assay
Reference: J:264500 Tsuchiya Y, et al., Ripply3 is required for the maintenance of epithelial sheets in the morphogenesis of pharyngeal pouches. Dev Growth Differ. 2018 Feb;60(2):87-96
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7786644
Gene symbol: Cdh1
Gene name: cadherin 1
Antibody: Anti-E-Cadherin (610181; Clone 36)
Detection system: Secondary antibody coupled to Alexa Fluor 555
Results
Specimen 1a: embryonic day 9.0 (more )
Note: 17-somite stage
Structure Cell Type Level Pattern Image Note
TS14: 2nd branchial arch epithelial cell Present 1a

Specimen 1b/b': embryonic day 9.0 (more )
Note: 19-somite stage
Structure Cell Type Level Pattern Image Note
TS14: 3rd branchial arch epithelial cell Present 1b' , 1b The first indication of morphogenesis of the 3rd pharyngeal arch was seen.
TS14: 2nd branchial arch epithelial cell Present 1b' , 1b
TS14: 3rd branchial arch endoderm epithelial cell Present 1b , 1b' The endodermal epithelium began to bend.

Specimen 1c: embryonic day 9.5 (more )
Note: 21-somite stage
Structure Cell Type Level Pattern Image Note
TS15: 3rd branchial arch endoderm epithelial cell Present 1c A 2nd bending occurred at a position posterior to the 1st bending site.
TS15: branchial arch epithelial cell Present 1c

Specimen 1d: embryonic day 9.5 (more )
Note: 23-somite stage
Structure Cell Type Level Pattern Image Note
TS15: 3rd branchial arch endoderm epithelial cell Present 1d A 2nd bending occurred at a position posterior to the 1st bending site.
TS15: branchial arch epithelial cell Present 1d

Specimen 1e: embryonic day 9.5 (more )
Note: 25-somite stage
Structure Cell Type Level Pattern Image Note
TS15: 3rd branchial arch endoderm epithelial cell Present 1e A third bending took place at the position where the first bending had occurred.
TS15: branchial arch epithelial cell Present 1e

Specimen 1f: embryonic day 9.5 (more )
Note: 27-somite stage
Structure Cell Type Level Pattern Image Note
TS15: 3rd branchial arch endoderm epithelial cell Present 1f A third bending took place at the position where the first bending had occurred, which connected the endoderm and the ectoderm epithelium, leading to the completion of the formation of the third pharyngeal pouch.
TS15: branchial arch epithelial cell Present 1f

Specimen 1l: embryonic day 9.0; Ripply3tm1Sjt/Ripply3tm1Sjt (more )
Note: 17-somite stage
Structure Cell Type Level Pattern Image Note
TS14: 2nd branchial arch epithelial cell Present 1l Similar as in the wild-type.

Specimen 1n/n': embryonic day 9.0; Ripply3tm1Sjt/Ripply3tm1Sjt (more )
Note: 19-somite stage
Structure Cell Type Level Pattern Image Note
TS14: 3rd branchial arch endoderm epithelial cell Present 1n , 1n' Morphological abnormality of the epithelial sheet was first observed, although the 1st bending of the endoderm sheet was observed. The epithelial sheet did not maintain the monolayer structure at the bending site.

Specimen 1m: embryonic day 9.5; Ripply3tm1Sjt/Ripply3tm1Sjt (more )
Note: 21-somite stage
Structure Cell Type Level Pattern Image Note
TS15: 3rd branchial arch endoderm epithelial cell Present 1m The 2nd bending of the endoderm sheet was observed; but again the epithelial morphology of the endoderm appeared to be partly disturbed.
TS15: branchial arch epithelial cell Present 1m

Specimen 1o: embryonic day 9.5; Ripply3tm1Sjt/Ripply3tm1Sjt (more )
Note: 23-somite stage
Structure Cell Type Level Pattern Image Note
TS15: 3rd branchial arch endoderm epithelial cell Present 1o The 2nd bending of the endoderm sheet was observed; but again the epithelial morphology of the endoderm appeared to be partly disturbed.

Specimen 1p: embryonic day 9.5; Ripply3tm1Sjt/Ripply3tm1Sjt (more )
Note: 25-somite stage
Structure Cell Type Level Pattern Image Note
TS15: branchial arch epithelial cell Present 1p Severe defect in the morphology of the 3rd and 4th pharyngeal arches, especially in the development of the mesenchyme in these arches.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
01/06/2026
MGI 6.24
The Jackson Laboratory