Gene Expression Data
Assay Details
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Assay
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Reference:
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J:89119
Jones L, et al., Pax6 is required for the normal development of the forebrain axonal connections. Development. 2002 Nov;129(21):5041-52
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:7736625
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Gene symbol:
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Sema3c
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Gene name:
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sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
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Probe:
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Sema3c probe
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Results
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Specimen
8A:
embryonic day 14.5
(more  )
Specimen
8A:
(close  )
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Genetic Background:
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involves: C57BL/6J * DBA/2J * NMRI
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: cerebral cortex intermediate zone |
Present |
Regionally restricted |
8A
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Expression in cortex confined to subventricular zone and intermediate zone of entire pallium, including dorsal, lateral and ventral pallial domains.
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| TS22: cerebral cortex subventricular zone |
Present |
Regionally restricted |
8A
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Expression in cortex confined to subventricular zone and intermediate zone of entire pallium, including dorsal, lateral and ventral pallial domains.
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Specimen
8B:
embryonic day 14.5; Pax6tm1Pgr/Pax6 +
(more )
Specimen
8B:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * DBA/2J * NMRI
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Mutant Allele(s):
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Pax6tm1Pgr/Pax6+
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
8C:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * DBA/2J * NMRI
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Mutant Allele(s):
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Pax6tm1Pgr/Pax6tm1Pgr
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: pallium |
Present |
Regionally restricted |
8C
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Expression completely abolished in region of ventral and lateral pallium.
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| TS22: cortical plate |
Present |
Regionally restricted |
8C
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In dorsal pallium, expression shifted into most superfical zone of cortical plate.
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Specimen
E18.5 wild type not shown:
embryonic day 18.5
(more )
Specimen
E18.5 wild type not shown:
(close )
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Genetic Background:
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involves: C57BL/6J * DBA/2J * NMRI
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: pallium |
Present |
Regionally restricted |
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Expression fainter but still detectable all along extending corticofugal axons torards basolateral telencephalon.
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Specimen
E18.5 Pax6-/- not shown:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * DBA/2J * NMRI
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Mutant Allele(s):
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Pax6tm1Pgr/Pax6tm1Pgr
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: pallium |
Present |
Regionally restricted |
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Expression not detectable within ventral and lateral pallium.
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Analysis Tools
