Gene Expression Data
Assay Details
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Assay
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Reference:
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J:321499
Lee DR, et al., Transcriptional heterogeneity of ventricular zone cells in the ganglionic eminences of the mouse forebrain. Elife. 2022 Feb 17;11:e71864
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:7720335
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Gene symbol:
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Zfhx3
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Gene name:
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zinc finger homeobox 3
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Probe:
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Mm-Zfhx3 (803471)
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Probe preparation:
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Antisense RNA
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Visualized with:
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Fluorescence
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Results
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Specimen
6B LGE/MGE:
embryonic day 12.5
(more  )
Note: Multi-labeled: green - Zfhx3; magenta - Ina (assay MGI:7720337); cyan - Mapt (assay MGI:7720336); red - Tcf4 (assay MGI:7720404).
Specimen
6B LGE/MGE:
(close  )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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Multi-labeled: green - Zfhx3; magenta - Ina (assay MGI:7720337); cyan - Mapt (assay MGI:7720336); red - Tcf4 (assay MGI:7720404).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: lateral ganglionic eminence |
Present |
Regionally restricted |
6B left
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Expression was predominantly in Dcx-positive postmitotic cells in the marginal zone. Expression was near the subventricular zone/marginal zone boundary. Expression was detected in a stripe of marginal zone cells in the ventral lateral ganglionic eminence.
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| TS20: medial ganglionic eminence |
Present |
Regionally restricted |
6B left
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Expression was predominantly in Dcx-positive postmitotic cells in the marginal zone. Expression was near the subventricular zone/marginal zone boundary.
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Specimen
6B CGE:
embryonic day 12.5
(more )
Note: Multi-labeled: green - Zfhx3; magenta - Ina (assay MGI:7720337); cyan - Mapt (assay MGI:7720336); red - Tcf4 (assay MGI:7720404).
Specimen
6B CGE:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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Multi-labeled: green - Zfhx3; magenta - Ina (assay MGI:7720337); cyan - Mapt (assay MGI:7720336); red - Tcf4 (assay MGI:7720404).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: caudal ganglionic eminence |
Present |
Regionally restricted |
6B right
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Expression was predominantly in Dcx-positive postmitotic cells in the marginal zone. Expression was near the subventricular zone/marginal zone boundary.
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Analysis Tools