Col9a1 RNA in situ Gene Expression Assay

Gene Expression Data
Assay Details

Assay

Reference:	J:44842 Savontaus M, et al., Mutation in type II collagen gene disturbs spinal development and gene expression patterns in transgenic Del1 mice. Lab Invest. 1997 Dec;77(6):591-600
Assay type:	RNA in situ
MGI Accession ID:	MGI:7718432
Gene symbol:	Col9a1
Gene name:	collagen, type IX, alpha 1

Probe:	pMCol9a1-1
Probe preparation:	Antisense labelled with S35 RNA
Visualized with:	Autoradiography

Results

Specimen 4E: embryonic day 14.5 (more

)
Note: Fixative was 4% formalin or 4% paraformaldehyde.

Structure	Level	Pattern	Image	Note
TS22: vertebra	Present	Regionally restricted	4E	Expressed predominantly in the vertebral body.

Specimen not shown: embryonic day 12.5 (more

)
Note: Fixative was 4% formalin or 4% paraformaldehyde.

Structure	Level	Pattern	Image	Note
TS20: vertebral pre-cartilage condensation	Present

Specimen not shown: embryonic day 18.5 (more

)
Note: Fixative was 4% formalin or 4% paraformaldehyde.

Structure	Level	Pattern	Image	Note
TS26: vertebra	Present	Widespread		Expressed throughout the vertebral column. Highest expression were in areas surrounding the nuclei pulposi.
TS26: nucleus pulposus	Absent

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 03/25/2025 MGI 6.24