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Gene Expression Data
Assay Details
Assay
Reference: J:154889 Deschamps C, et al., Expression of ephrinA5 during development and potential involvement in the guidance of the mesostriatal pathway. Exp Neurol. 2009 Oct;219(2):466-80
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7714979
Gene symbol: Efna5
Gene name: ephrin A5
Antibody: anti-ephrinA5
Detection system: Secondary antibody coupled to Alexa Fluor 488
Results
Specimen 6a: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: lateral ganglionic eminence Present 6a
TS20: neocortex Present 6a
Specimen 6b: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: lateral ganglionic eminence Present 6b
TS20: neocortex Present 6b
TS20: thalamus Present 6b
Specimen 6c: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present 6c
Specimen 6d/f: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: lateral ganglionic eminence Present Graded 6d , 6f A latero-medial expression gradient was seen.
TS20: hypothalamus Present 6d , 6f
TS20: thalamus Present 6d , 6f
Specimen 6e: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: neocortex Present 6e
TS20: lateral ganglionic eminence Present Graded 6e A latero-medial expression gradient was seen.
TS20: telencephalon Present Regionally restricted 6e Expressed in the olfactory area.
Specimen 6g: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: main olfactory bulb Present 6g
TS22: neocortex Present 6g
TS22: subpallium Present Regionally restricted 6g ventral telencephalon
TS22: lateral ganglionic eminence Present Graded 6g A rostro-caudal expression gradient was seen.
Specimen 6h: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hypothalamus Present 6h
TS22: lateral ganglionic eminence Present 6h
TS22: neocortex Present 6h
TS22: pons Present 6h
TS22: superior colliculus Present 6h
TS22: thalamus Present 6h
Specimen 6i: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: superior colliculus Present 6i
TS22: red nucleus Absent 6i
Specimen 6j: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: lateral ganglionic eminence Present Graded 6j A latero-medial expression gradient was seen.
Specimen 6k/l: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: lateral ganglionic eminence Present Graded 6k , 6l A latero-medial expression gradient was seen.
TS22: telencephalon septum Present 6k
Specimen 6m: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: neocortex Present 6m
TS24: olfactory tract Present 6m
TS24: subpallium Present 6m ventral telencephalon
TS24: lateral ganglionic eminence Present Graded 6m A ventro-dorsal gradient was seen.
Specimen 6n: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: lateral ganglionic eminence Present 6n
TS24: neocortex Present 6n
TS24: thalamus Present 6n
Specimen 6o: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebral aqueduct Present 6o
TS24: neocortex Present 6o
TS24: superior colliculus Present 6o
Specimen 6p/r: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: lateral ganglionic eminence Present Graded 6p , 6r A latero-medial expression gradient was seen.
TS24: neocortex Present 6p
TS24: olfactory tract Present 6p
Specimen 6q: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: neocortex Present 6q
TS24: telencephalon septum Present 6q
TS24: lateral ganglionic eminence Present Graded 6q A latero-medial expression gradient was seen.
TS24: ventral striatum Present Regionally restricted 6q Expressed in the accumbens nucleus.
Specimen 7a: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex Present 7a
TS26: corpus striatum Present 7a
TS26: subpallium Present 7a ventral telencephalon
Specimen 7b: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex Present 7b
TS26: corpus striatum Present 7b
TS26: main olfactory bulb Present 7b
TS26: thalamus Present 7b
TS26: subpallium Present 7b ventral telencephalon
Specimen 7c: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex Present 7c
TS26: red nucleus Absent 7c
Specimen 7d: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex Present 7d
TS26: corpus striatum Present 7d
TS26: telencephalon septum Present 7d
Specimen 7e: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex Present 7e
TS26: corpus striatum Present 7e
TS26: subpallium Present 7e ventral telencephalon
Specimen 7f: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cerebral cortex Present 7f
TS27: corpus striatum Present 7f
TS27: subpallium Present 7f ventral telencephalon
Specimen 7g: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cerebral cortex Present 7g
TS27: corpus striatum Present 7g
TS27: main olfactory bulb Present 7g
TS27: thalamus Present 7g
TS27: subpallium Present 7g ventral telencephalon
Specimen 7h: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cerebral cortex Present 7h
TS27: red nucleus Absent 7h
Specimen 7i: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cerebral cortex Present 7i
TS27: corpus striatum Present 7i
TS27: telencephalon septum Present 7i
Specimen 7j: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cerebral cortex Present 7j
TS27: corpus striatum Present 7j
TS27: subpallium Present 7j ventral telencephalon
Specimen 8a/c: embryonic day 16.5 (more )
Note: Double labeled: green - Efna5; red - Slc6a3 (assay MGI:7714980).
Structure Level Pattern Image Note
TS24: thalamus Present Regionally restricted 8a , 8c Expression was distributed dorsally to the DAT/Slc6a3+ mesencephalic dopaminergic axons.
Specimen 8d/f: embryonic day 18.5 (more )
Note: Double labeled: green - Efna5; red - Slc6a3 (assay MGI:7714980).
Structure Level Pattern Image Note
TS26: corpus striatum Present Graded 8f , 8d Ventro-dorsal and rostro-caudal gradients were seen.
Specimen not shown: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: brain Weak Expression was dramatically decreased at P7.
Specimen not shown: postnatal adult (more )
Structure Level Pattern Image Note
TS28: brain Absent No expression in the adult.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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01/06/2026
MGI 6.24 		The Jackson Laboratory