Gene Expression Data
Assay Details
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Assay
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Reference:
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J:65297
Pratt T, et al., A role for pax6 in the normal development of dorsal thalamus and its cortical connections. Development. 2000 Dec;127(23):5167-78
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:7712051
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Gene symbol:
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Lhx1
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Gene name:
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LIM homeobox protein 1
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Probe:
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Lim1/Lhx1 probe
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
5A:
embryonic day 13.5
(more  )
Specimen
5A:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
5B:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS21: thalamus |
Present |
Regionally restricted |
5B
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Expression extends over body of dorsal thalamus.
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Specimen
5C:
embryonic day 15.5
(more )
Specimen
5C:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
5D:
embryonic day 15.5
(more )
Specimen
5D:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: prethalamus |
Present |
Regionally restricted |
5D
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Expression restricted to specific nuclei in ventral thalamus.
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Specimen
5E:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: dorsal thalamus |
Present |
Regionally restricted |
5E
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Large band of ectopic expression within body of dorsal thalamus at all rostrocaudal levels.
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Specimen
5F:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: pretectum |
Absent |
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5F
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| TS23: prethalamus |
Present |
Regionally restricted |
5F
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Expression in ventral thalamus is distorted and no longer restricted to discrete areas.
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Analysis Tools