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Gene Expression Data
Assay Details
Assay
Reference: J:112208 Fotaki V, et al., Abnormal positioning of diencephalic cell types in neocortical tissue in the dorsal telencephalon of mice lacking functional Gli3. J Neurosci. 2006 Sep 6;26(36):9282-92
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7711122
Gene symbol: Pax6
Gene name: paired box 6
Antibody: anti-Pax6
Detection system: Secondary antibody coupled to horseradish peroxidase
Results
Specimen 2A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: epithalamus Present 2A
TS20: thalamus Present 2A
Specimen 2A': embryonic day 12.5; Gli3Xt/Gli3Xt (more )
Structure Level Pattern Image Note
TS20: epithalamus Present 2A' Expression in this mutant is similar to wild-type.
TS20: thalamus Present 2A' Expression in this mutant is similar to wild-type.
Specimen 2B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: epithalamus Present 2B
TS20: thalamus Present 2B
Specimen 2B': embryonic day 12.5; Gli3Xt/Gli3Xt (more )
Structure Level Pattern Image Note
TS20: epithalamus Present 2B' Expression in this mutant is similar to wild-type.
TS20: thalamus Present 2B' Expression in this mutant is similar to wild-type.
Specimen 2C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: neocortex Present 2C
TS20: telencephalon Present Regionally restricted 2C Expression is in the dorsomedial telencephalon and is absent from the ventral telencephalon.
TS20: forebrain Present Regionally restricted 2C Expression is in the ventricular zone of the eminentia thalami.
TS20: ganglionic eminence Absent 2C
TS20: lateral ventricle choroid plexus Absent 2C
Specimen 2C': embryonic day 12.5; Gli3Xt/Gli3Xt (more )
Structure Level Pattern Image Note
TS20: diencephalon Present 2C' Expression is continuous throughout the diencephalon and dorsal telencephalon.
TS20: telencephalon Present Regionally restricted 2C' Expression is dorsal.
TS20: ganglionic eminence Absent 2C'
Specimen 2D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: neocortex Present 2D
TS20: telencephalon Present Regionally restricted 2D Expression is in the dorsomedial telencephalon and is absent from the ventral telencephalon.
TS20: ganglionic eminence Absent 2D
TS20: lateral ventricle choroid plexus Absent 2D
Specimen 2D': embryonic day 12.5; Gli3Xt/Gli3Xt (more )
Structure Level Pattern Image Note
TS20: diencephalon Present 2D' Expression is continuous throughout the diencephalon and dorsal telencephalon.
TS20: telencephalon Present Regionally restricted 2D' Expression is dorsal.
TS20: ganglionic eminence Absent 2D'
Specimen 4A: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: epithalamus Present 4A
TS21: thalamus Present 4A
TS21: telencephalon Present Regionally restricted 4A Expression is in the dorsomedial telencephalon.
TS21: forebrain Present Regionally restricted 4A Expression is in the ventricular zone of the eminentia thalami.
Specimen 4A': embryonic day 13.5; Gli3Xt/Gli3Xt (more )
Structure Level Pattern Image Note
TS21: epithalamus Present 4A'
TS21: thalamus Present 4A'
TS21: forebrain Present Regionally restricted 4A' Expression is in the ventricular zone of the eminentia thalami.
Specimen 9H: embryonic day 13.5; Gli3Xt/Gli3Xt (more )
Structure Level Pattern Image Note
TS21: neocortex Present Regionally restricted 9H
Specimen not shown WT E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: telencephalon Present Regionally restricted Expression is dorsal.
TS22: thalamus Present Regionally restricted Expression is in the ventral thalamus.
Specimen not shown Gli3Xt E14.5: embryonic day 14.5; Gli3Xt/Gli3Xt (more )
Structure Level Pattern Image Note
TS22: telencephalon Present Regionally restricted Expression is dorsal.
TS22: thalamus Present Regionally restricted Expression is in the ventral thalamus.
Specimen not shown WTE15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Present Regionally restricted Expression is dorsal.
TS23: thalamus Present Regionally restricted Expression is in the ventral thalamus.
Specimen not shown Gli3Xt E15.5: embryonic day 15.5; Gli3Xt/Gli3Xt (more )
Structure Level Pattern Image Note
TS23: telencephalon Present Regionally restricted Expression is dorsal.
TS23: thalamus Present Regionally restricted Expression is in the ventral thalamus.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
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