Gene Expression Data
Assay Details
Assay
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Reference:
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J:308968
Sigulinsky CL, et al., Expression of Sonic Hedgehog and pathway components in the embryonic mouse head: anatomical relationships between regulators of positive and negative feedback. BMC Res Notes. 2021 Aug 5;14(1):300
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:7664634
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Gene symbol:
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Ptch1
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Gene name:
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patched 1
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Probe:
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Ptch1 probe
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
1D:
embryonic day 15.5
(more )
Specimen
1D:
(close )
Genetic Background:
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129S1/SvImJ
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
2V:
embryonic day 15.5
(more )
Specimen
2V:
(close )
Genetic Background:
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129S1/SvImJ
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Age:
|
embryonic day 15.5
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS23: upper jaw molar |
Present |
Widespread |
2V
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Expression throughout epithelial and mesenchymal structures.
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TS23: dental sac |
Strong |
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2V
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Strongest expression in condensing ectomesenchyme, including dental papilla and follicle.
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TS23: upper jaw molar dental papilla |
Strong |
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2V
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Strongest expression in condensing ectomesenchyme, including dental papilla and follicle.
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TS23: stellate reticulum |
Present |
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2V
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Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.
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TS23: stratum intermedium |
Present |
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2V
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Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.
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TS23: upper jaw molar epithelium |
Present |
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2V
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Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.
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Specimen
2W:
embryonic day 15.5
(more )
Specimen
2W:
(close )
Genetic Background:
|
129S1/SvImJ
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Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: lower jaw molar |
Present |
Widespread |
2W
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Expression throughout epithelial and mesenchymal structures.
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TS23: dental sac |
Strong |
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2W
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Strongest expression in condensing ectomesenchyme, including dental papilla and follicle, and stellate reticulum and pedicle.
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TS23: lower jaw molar dental papilla |
Strong |
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2W
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Strongest expression in condensing ectomesenchyme, including dental papilla and follicle, and stellate reticulum and pedicle.
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TS23: lower jaw molar epithelium |
Strong |
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2W
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Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.
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TS23: stellate reticulum |
Strong |
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2W
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Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.
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TS23: stratum intermedium |
Strong |
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2W
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Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.
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Specimen
2X:
embryonic day 15.5
(more )
Specimen
2X:
(close )
Genetic Background:
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129S1/SvImJ
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Age:
|
embryonic day 15.5
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS23: hair follicle |
Present |
Widespread |
2X
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Expression throughout epithelial and mesenchymal components of hair follicle.
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TS23: hair epidermal placode |
Strong |
Regionally restricted |
2X
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Strongest expression in distal half of epithelial-derived hair peg, both in basal layer epidermal cells, comprising outer layer cells of hair peg, and cells of interior.
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TS23: hair follicle dermal papilla |
Present |
Regionally restricted |
2X
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Expression uniformly through dermal condensate.
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TS23: hair |
Weak |
Regionally restricted |
2X
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Weak expression in most proximal aspect of hair peg.
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TS23: dermis |
Weak |
Regionally restricted |
2X
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Weak expression in surrounding noncondensed dermal mesenchyme directly adjacent to hair peg and dermal condensate.
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Specimen
2Y:
embryonic day 15.5
(more )
Specimen
2Y:
(close )
Genetic Background:
|
129S1/SvImJ
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Age:
|
embryonic day 15.5
|
Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS23: palatal shelf |
Present |
Widespread |
2Y
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Expression throughout epithelial and mesenchymal structures.
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TS23: palatal shelf epithelium |
Strong |
Regionally restricted |
2Y
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Strong expression in thickened palatal oral epithelium in region overlapping with but extending beyond that of Shh expression.
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TS23: palatal shelf mesenchyme |
Strong |
Graded |
2Y
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Robust expression extending into palatal mesenchyme immediately adjacent to palatal oral epithelium in a gradient fashion.
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Specimen
2Z:
embryonic day 15.5
(more )
Specimen
2Z:
(close )
Genetic Background:
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129S1/SvImJ
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS23: eyelid |
Present |
Widespread |
2Z
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Expression throughout epithelial and mesenchymal structures.
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TS23: eyelid epithelium |
Strong |
Regionally restricted |
2Z
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Stronger expression in epithelium. Strong expression within basal layer eyelid epithelium in similar range of basal as Ptch2 expression.
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TS23: lower eyelid epithelium |
Present |
Regionally restricted |
2Z
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Following fusion, expression in basal layer of eyelid epithelium originating from both upper and lower lid primordia.
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TS23: upper eyelid epithelium |
Present |
Regionally restricted |
2Z
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Following fusion, expression in basal layer of eyelid epithelium originating from both upper and lower lid primordia.
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TS23: eyelid mesenchyme |
Weak |
Regionally restricted |
2Z
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Weaker expression extends into adjacent mesenchyme of eyelid tip.
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Specimen
2AA:
embryonic day 15.5
(more )
Specimen
2AA:
(close )
Genetic Background:
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129S1/SvImJ
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Age:
|
embryonic day 15.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS23: neural retina |
Present |
Regionally restricted |
2AA
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Expression throughout both retinal layers, with slightly stronger expression in neuroblast layer.
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TS23: eye anterior segment |
Present |
Regionally restricted |
2AA
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Weak expression in stroma of iris.
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Specimen
2BB:
embryonic day 15.5
(more )
Specimen
2BB:
(close )
Genetic Background:
|
129S1/SvImJ
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Age:
|
embryonic day 15.5
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Sex:
|
Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: retina |
Present |
Widespread |
2BB
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Expression throughout epithelial and mesenchymal structures.
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TS23: retina nuclear layer |
Present |
Regionally restricted |
2BB
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Expression overlapping with that of Gli1 in neuroblast layer of neural retina
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TS23: retina ganglion cell layer |
Present |
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2BB
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Expression extended into differentiated cell layer.
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TS23: perioptic mesenchyme |
Present |
Regionally restricted |
2BB
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Narrow band of expression in scleral condensation of extraocular mesenchyme, marking boundary with retina pigmented epithelium.
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