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Gene Expression Data
Assay Details
Assay
Reference: J:308968 Sigulinsky CL, et al., Expression of Sonic Hedgehog and pathway components in the embryonic mouse head: anatomical relationships between regulators of positive and negative feedback. BMC Res Notes. 2021 Aug 5;14(1):300
Assay type: RNA in situ
MGI Accession ID: MGI:7664634
Gene symbol: Ptch1
Gene name: patched 1
Probe: Ptch1 probe
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1D: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: head Present Regionally restricted 1D
TS23: eyelid Strong 1D Robust expression across all tissues examined.
TS23: hair follicle Strong 1D Robust expression across all tissues examined.
TS23: molar Strong 1D Robust expression across all tissues examined.
TS23: palatal rugae Strong 1D Robust expression across all tissues examined.
TS23: retina Strong 1D Robust expression across all tissues examined.

Specimen 2V: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw molar Present Widespread 2V Expression throughout epithelial and mesenchymal structures.
TS23: dental sac Strong 2V Strongest expression in condensing ectomesenchyme, including dental papilla and follicle.
TS23: upper jaw molar dental papilla Strong 2V Strongest expression in condensing ectomesenchyme, including dental papilla and follicle.
TS23: stellate reticulum Present 2V Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.
TS23: stratum intermedium Present 2V Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.
TS23: upper jaw molar epithelium Present 2V Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.

Specimen 2W: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw molar Present Widespread 2W Expression throughout epithelial and mesenchymal structures.
TS23: dental sac Strong 2W Strongest expression in condensing ectomesenchyme, including dental papilla and follicle, and stellate reticulum and pedicle.
TS23: lower jaw molar dental papilla Strong 2W Strongest expression in condensing ectomesenchyme, including dental papilla and follicle, and stellate reticulum and pedicle.
TS23: lower jaw molar epithelium Strong 2W Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.
TS23: stellate reticulum Strong 2W Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.
TS23: stratum intermedium Strong 2W Robust expression in internal and external dental epithelium, intermediate stratum, and distal stellate reticulum.

Specimen 2X: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: hair follicle Present Widespread 2X Expression throughout epithelial and mesenchymal components of hair follicle.
TS23: hair epidermal placode Strong Regionally restricted 2X Strongest expression in distal half of epithelial-derived hair peg, both in basal layer epidermal cells, comprising outer layer cells of hair peg, and cells of interior.
TS23: hair follicle dermal papilla Present Regionally restricted 2X Expression uniformly through dermal condensate.
TS23: hair Weak Regionally restricted 2X Weak expression in most proximal aspect of hair peg.
TS23: dermis Weak Regionally restricted 2X Weak expression in surrounding noncondensed dermal mesenchyme directly adjacent to hair peg and dermal condensate.

Specimen 2Y: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: palatal shelf Present Widespread 2Y Expression throughout epithelial and mesenchymal structures.
TS23: palatal shelf epithelium Strong Regionally restricted 2Y Strong expression in thickened palatal oral epithelium in region overlapping with but extending beyond that of Shh expression.
TS23: palatal shelf mesenchyme Strong Graded 2Y Robust expression extending into palatal mesenchyme immediately adjacent to palatal oral epithelium in a gradient fashion.

Specimen 2Z: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: eyelid Present Widespread 2Z Expression throughout epithelial and mesenchymal structures.
TS23: eyelid epithelium Strong Regionally restricted 2Z Stronger expression in epithelium. Strong expression within basal layer eyelid epithelium in similar range of basal as Ptch2 expression.
TS23: lower eyelid epithelium Present Regionally restricted 2Z Following fusion, expression in basal layer of eyelid epithelium originating from both upper and lower lid primordia.
TS23: upper eyelid epithelium Present Regionally restricted 2Z Following fusion, expression in basal layer of eyelid epithelium originating from both upper and lower lid primordia.
TS23: eyelid mesenchyme Weak Regionally restricted 2Z Weaker expression extends into adjacent mesenchyme of eyelid tip.

Specimen 2AA: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Present Regionally restricted 2AA Expression throughout both retinal layers, with slightly stronger expression in neuroblast layer.
TS23: eye anterior segment Present Regionally restricted 2AA Weak expression in stroma of iris.

Specimen 2BB: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: retina Present Widespread 2BB Expression throughout epithelial and mesenchymal structures.
TS23: retina nuclear layer Present Regionally restricted 2BB Expression overlapping with that of Gli1 in neuroblast layer of neural retina
TS23: retina ganglion cell layer Present 2BB Expression extended into differentiated cell layer.
TS23: perioptic mesenchyme Present Regionally restricted 2BB Narrow band of expression in scleral condensation of extraocular mesenchyme, marking boundary with retina pigmented epithelium.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory