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Gene Expression Data
Assay Details
Assay
Reference: J:112922 Miura E, et al., Distinct expression of Cbln family mRNAs in developing and adult mouse brains. Eur J Neurosci. 2006 Aug;24(3):750-60
Assay type: RNA in situ
MGI Accession ID: MGI:7664064
Gene symbol: Cbln2
Gene name: cerebellin 2 precursor protein
Probe: Cbln2 probe
Probe preparation: labelled with P33
Visualized with: Autoradiography
Results
Specimen 1C: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Strong 1C Higher levels of expression in olfactory bulb, cerebral cortex, and superior and inferior colliculi.
TS28: inferior colliculus Strong 1C Higher levels of expression in olfactory bulb, cerebral cortex, and superior and inferior colliculi.
TS28: main olfactory bulb Strong 1C Higher levels of expression in olfactory bulb, cerebral cortex, and superior and inferior colliculi.
TS28: superior colliculus Strong 1C Higher levels of expression in olfactory bulb, cerebral cortex, and superior and inferior colliculi.
TS28: hypothalamic nucleus Strong Regionally restricted 1C Higher levels of expression in certain thalamic and hypothalamic nuclei.
TS28: thalamic nucleus Strong Regionally restricted 1C Higher levels of expression in certain thalamic and hypothalamic nuclei.
TS28: deep cerebellar nucleus Absent 1C

Specimen 2B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer II Moderate 2B
TS28: cortical layer III Moderate 2B
TS28: cortical layer IV Moderate 2B
TS28: cortical layer VI Moderate 2B
TS28: cortical layer I Absent 2B
TS28: cortical layer V Absent 2B
TS28: anterior dorsal thalamic nucleus Absent 2B
TS28: anterior ventral thalamic nucleus Absent 2B
TS28: central medial thalamic nucleus Strong 2B
TS28: nucleus reuniens Moderate 2B
TS28: paraventricular thalamic nucleus Moderate 2B
TS28: paraventricular hypothalamic nucleus Moderate 2B

Specimen 2E: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retrosplenial granular cortex Moderate 2E
TS28: subiculum Moderate 2E
TS28: CA1 pyramidal cell layer Absent 2E
TS28: CA3 pyramidal cell layer Absent 2E
TS28: dentate gyrus granule cell layer Absent 2E
TS28: parafascicular nucleus Strong 2E
TS28: dorsal lateral geniculate nucleus Weak 2E
TS28: arcuate nucleus Weak 2E

Specimen 2H: postnatal adult (more )
Structure Level Pattern Image Note
TS28: inferior colliculus Present Regionally restricted 2H High expression in dorsal nucleus.. Moderate expression in external nuclei. Very weak expression in central nucleus. No expression in nucleus brachium.
TS28: entorhinal cortex Absent 2H

Specimen 2K: postnatal adult (more )
Structure Level Pattern Image Note
TS28: solitary tract nucleus Moderate 2K
TS28: cerebellum granule cell layer Trace 2K
TS28: cerebellum Purkinje cell layer Absent 2K
TS28: cerebellum molecular layer Absent 2K
TS28: deep cerebellar nucleus Absent 2K

Specimen 3B1: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: main olfactory bulb Strong 3B1 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS21: thalamus Strong 3B1 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.

Specimen 3B2: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: inferior colliculus Strong 3B2 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS23: main olfactory bulb Strong 3B2 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS23: thalamus Strong 3B2 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS23: neocortex Present Graded 3B2 Transient expression in gradient-like distribution starting from rostral pole at E15 and spreading caudally.

Specimen 3B3: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: inferior colliculus Strong 3B3 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS25: main olfactory bulb Strong 3B3 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS25: thalamus Strong 3B3 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.

Specimen 3B4: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: inferior colliculus Strong 3B4 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS27: main olfactory bulb Strong 3B4 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS27: thalamus Strong 3B4 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS27: trigeminal V spinal sensory nucleus Strong 3B4 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS27: neocortex layer Present Graded 3B4 Rostrocaudal gradient of expression ascribed to different expression levels in cortical plate and differentiating cortical layers.

Specimen 3B5: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: inferior colliculus Strong 3B5 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS28: main olfactory bulb Strong 3B5 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS28: thalamus Strong 3B5 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS28: trigeminal V spinal sensory nucleus Strong 3B5 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.

Specimen 3B6: postnatal day 14 (more )
Structure Level Pattern Image Note
TS28: inferior colliculus Strong 3B6 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS28: main olfactory bulb Strong 3B6 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS28: thalamus Strong 3B6 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS28: trigeminal V spinal sensory nucleus Strong 3B6 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.

Specimen 3B7: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: inferior colliculus Strong 3B7 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS28: main olfactory bulb Strong 3B7 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS28: thalamus Strong 3B7 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.
TS28: trigeminal V spinal sensory nucleus Strong 3B7 Expression detected as early as E13. Higher levels of expression consistently detected in olfactory bulb, thalamus, inferior colliculus and trigeminal spinal tract nucleus throughout development.

Specimen 4F: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: brain Present 4F

Specimen 4G: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: brain Present 4G

Specimen 4I: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: brain Present 4I

Specimen 4K: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: neocortex Present Graded 4K

Specimen 4L: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: neocortex Present Graded 4L

Specimen 4M: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: neocortex Present Graded 4M

Specimen 4N: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: neocortex Present Graded 4N

Specimen 4O: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: neocortex Present Graded 4O

Specimen 4P: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: neocortex Present Graded 4P

Specimen S2B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb Present Widespread S2B Widely expressed in olfactory bulb, including glomerular, mitral and granular layers.
TS28: main olfactory bulb glomerular layer Moderate S2B
TS28: main olfactory bulb granule cell layer Moderate S2B
TS28: main olfactory bulb mitral cell layer Moderate S2B

Specimen S2E: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer II Moderate S2E
TS28: cortical layer III Moderate S2E
TS28: cortical layer IV Moderate S2E
TS28: cortical layer VI Moderate S2E
TS28: cortical layer I Absent S2E
TS28: cortical layer V Absent S2E
TS28: claustrum Moderate S2E
TS28: piriform cortex Weak S2E
TS28: endopiriform nucleus Weak S2E

Specimen S2H: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer II Moderate S2H
TS28: cortical layer III Moderate S2H
TS28: cortical layer IV Moderate S2H
TS28: cortical layer VI Moderate S2H
TS28: cortical layer I Absent S2H
TS28: cortical layer V Absent S2H
TS28: claustrum Moderate S2H
TS28: medial septal nucleus Weak S2H

Specimen S2K: postnatal adult (more )
Structure Level Pattern Image Note
TS28: preoptic area Strong Regionally restricted S2K High expression in preoptic nucleus.
TS28: hypothalamus Present Regionally restricted S2K Moderate expression in posterior area and periventricular nucleus. Weak expression in lateral area and dorsal medial nucleus.
TS28: paraventricular hypothalamic nucleus Moderate S2K

Specimen S3B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retrosplenial granular cortex Moderate S3B
TS28: ventral medial thalamic nucleus Absent S3B
TS28: ventromedial hypothalamic nucleus Weak S3B
TS28: CA1 pyramidal cell layer Absent S3B
TS28: CA3 pyramidal cell layer Absent S3B
TS28: dentate gyrus granule cell layer Absent S3B
TS28: medial habenular nucleus Moderate S3B
TS28: lateral habenular nucleus Strong S3B
TS28: hypothalamic nucleus Moderate Regionally restricted S3B Moderate expression in posterior nucleus.

Specimen S3E: postnatal adult (more )
Structure Level Pattern Image Note
TS28: subiculum Moderate S3E
TS28: superior colliculus Moderate S3E
TS28: median raphe nucleus Weak S3E

Specimen S3H: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dorsal nucleus of lateral lemniscus Strong S3H
TS28: inferior colliculus Present Regionally restricted S3H High expression in dorsal nucleus. Moderate expression in external nuclei. Very weak expression in central nucleus. No expression in nucleus brachium.
TS28: dorsal cochlear nucleus Absent S3H
TS28: ventral cochlear nucleus Absent S3H
TS28: trigeminal V spinal sensory nucleus Trace S3H
TS28: vestibular nucleus Trace S3H
TS28: solitary tract nucleus Moderate S3H

Specimen S3K: postnatal adult (more )
Structure Level Pattern Image Note
TS28: trigeminal V spinal sensory nucleus Weak S3K

Specimen S4A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus CA1 Present S4A
TS28: dentate gyrus polymorphic layer Present Clusters S4A Dispersed clusters of expression in polymorphic layer of dentate gyrus.

Specimen not shown: postnatal adult (more )
Note: Data presented in Table 1.
Structure Level Pattern Image Note
TS28: trigeminal V motor nucleus Weak
TS28: trigeminal V principal sensory nucleus Trace
TS28: amygdala Absent
TS28: caudate-putamen Absent
TS28: globus pallidus Absent
TS28: lateral septal nucleus Absent
TS28: oculomotor nucleus Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory