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Gene Expression Data
Assay Details
Assay
Reference: J:186285 Lefkovics K, et al., Comparative analysis of type II classic cadherin mRNA distribution patterns in the developing and adult mouse somatosensory cortex and hippocampus suggests significant functional redundancy. J Comp Neurol. 2012 May 1;520(7):1387-1405
Assay type: RNA in situ
MGI Accession ID: MGI:7492302
Gene symbol: Cdh24
Gene name: cadherin-like 24
Probe: Cdh24 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Using another probe (MGI:6169487) based on the Allen Brain Atlas probe information showed identical expression pattern.
Results
Specimen 3R: postnatal adult (more )
Structure Level Pattern Image Note
TS28: somatosensory cortex Present 3R

Specimen 5P: embryonic day 14.0 (more )
Structure Cell Type Level Pattern Image Note
TS22: hippocampus GABAergic interneuron Present Regionally restricted 5P Expressed in the ventricular zone. Summarized in Table 3.

Specimen 5Q: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: dentate gyrus Weak Regionally restricted 5Q Expressed in the ventricular zone.
TS24: hippocampus Present Regionally restricted 5Q Expressed in the hippocampal plate (the future pyramidal cell layer). Summarized in Table 3.
TS24: hippocampus ventricular layer Present 5Q

Specimen 5R: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: CA1 pyramidal cell layer Present 5R Summarized in Table 3.
TS27: dentate gyrus granule cell layer Present 5R Summarized in Table 3.
TS27: dentate gyrus hilus Present 5R Summarized in Table 3.
TS27: dentate gyrus molecular layer Present 5R Summarized in Table 3.
TS27: hippocampus CA3 Present 5R Summarized in Table 3.
TS27: hippocampus molecular layer Present 5R Summarized in Table 3.
TS27: hippocampus stratum lacunosum Present 5R Summarized in Table 3.
TS27: hippocampus stratum lucidum Present 5R Summarized in Table 3.
TS27: hippocampus stratum oriens Present 5R Summarized in Table 3.
TS27: hippocampus stratum radiatum Present 5R Summarized in Table 3.
TS27: hippocampus pyramidal cell layer Present 5R Expressed at the same level in CA1 and CA3.

Specimen 7F1: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present Scattered 7F1 Expressed in a large number of cells.
TS28: CA1 pyramidal cell layer Strong 7F1
TS28: hippocampus stratum radiatum Present 7F1

Specimen 7F2: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present Scattered 7F2 Expressed in a large number of cells.
TS28: CA1 pyramidal cell layer Strong 7F2
TS28: hippocampus stratum radiatum Present 7F2

Specimen 7F3: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: CA3 pyramidal cell layer Strong 7F3
TS28: hippocampus stratum lucidum Present 7F3

Specimen 7F4: postnatal adult (more )
Structure Level Pattern Image Note
TS28: CA3 pyramidal cell layer Strong 7F4
TS28: hippocampus stratum lucidum Present 7F4

Specimen 7F5: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Strong 7F5
TS28: dentate gyrus hilus Present 7F5
TS28: dentate gyrus molecular layer Present Regionally restricted 7F5 Expressed in cells close to the granule cell layer.

Specimen 7F6: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Strong 7F6
TS28: dentate gyrus hilus Present 7F6
TS28: dentate gyrus molecular layer Absent 7F6

Specimen 8L: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum radiatum Present 8L Also expressed in cells on the stratum radiatum-stratum lacunosum-moleculare border.
TS28: hippocampus molecular layer Present 8L
TS28: hippocampus stratum lacunosum Present 8L

Specimen 10F1: embryonic day 14.0 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS22: cerebral cortex intermediate zone Present 10F1
TS22: cerebral cortex ventricular layer Present 10F1
TS22: cortical plate Present 10F1
TS22: cerebral cortex marginal layer Absent 10F1
TS22: cerebral cortex subventricular zone Absent 10F1
TS22: cortical subplate Absent 10F1

Specimen 10F2: embryonic day 16.0 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS24: cerebral cortex intermediate zone Present 10F2
TS24: cerebral cortex marginal layer Present 10F2
TS24: cerebral cortex ventricular layer Present 10F2
TS24: cortical plate Present 10F2
TS24: cerebral cortex subventricular zone Absent 10F2
TS24: cortical subplate Absent 10F2

Specimen 10F3: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex subventricular zone Present 10F3
TS26: cerebral cortex ventricular layer Present 10F3

Specimen 10F4: postnatal day 1 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS27: cerebral cortex intermediate zone Absent 10F4
TS27: cortical layer I Present 10F4
TS27: cortical layer II Present 10F4
TS27: cortical layer III Present 10F4
TS27: cortical layer IV Present 10F4
TS27: cortical layer V Present 10F4
TS27: cortical layer VI Present 10F4
TS27: cortical subplate Present 10F4

Specimen 10F5: postnatal day 10 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS28: cortical layer I Present 10F5
TS28: cortical layer II Present 10F5
TS28: cortical layer III Present 10F5
TS28: cortical layer IV Present 10F5
TS28: cortical layer V Present 10F5
TS28: cortical layer VI Present 10F5
TS28: cortical subplate Present 10F5
TS28: cerebral hemisphere white matter Absent 10F5

Specimen 10F6: postnatal adult (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS28: cortical layer I Present 10F6 fairly low levels
TS28: cortical layer II Present 10F6 fairly low levels
TS28: cortical layer III Present 10F6 fairly low levels
TS28: cortical layer IV Present 10F6 fairly low levels
TS28: cortical layer V Present 10F6 fairly low levels
TS28: cortical layer VI Present 10F6 fairly low levels
TS28: cortical subplate Present 10F6 fairly low levels
TS28: cerebral hemisphere white matter Absent 10F6


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory