About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:186285 Lefkovics K, et al., Comparative analysis of type II classic cadherin mRNA distribution patterns in the developing and adult mouse somatosensory cortex and hippocampus suggests significant functional redundancy. J Comp Neurol. 2012 May 1;520(7):1387-1405
Assay type: RNA in situ
MGI Accession ID: MGI:7492299
Gene symbol: Cdh19
Gene name: cadherin 19, type 2
Probe: Cdh19 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Using another probe (MGI:6169479) based on the Allen Brain Atlas probe information showed identical expression pattern.
Results
Specimen 3L: postnatal adult (more )
Structure Level Pattern Image Note
TS28: somatosensory cortex Present 3L
Specimen 5G: embryonic day 14.0 (more )
Structure Cell Type Level Pattern Image Note
TS22: hippocampus GABAergic interneuron Present Regionally restricted 5G Expressed in the ventricular zone. Summarized in Table 3.
Specimen 5H: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hippocampus ventricular layer Present 5H Summarized in Table 3.
TS24: hippocampus Present Regionally restricted 5H Expressed in the hippocampal plate (the future pyramidal cell layer). High expression in the marginal zone. Very low expression in the intermediate zone.
TS24: dentate gyrus Weak Regionally restricted 5H Weak expression in the ventricular zone.
Specimen 5I: postnatal day 1 (more )
Structure Cell Type Level Pattern Image Note
TS27: dentate gyrus granule cell layer Present 5I Summarized in Table 3.
TS27: dentate gyrus hilus Present 5I Summarized in Table 3.
TS27: dentate gyrus molecular layer Present 5I Summarized in Table 3.
TS27: hippocampus molecular layer Present 5I Summarized in Table 3.
TS27: hippocampus stratum lacunosum Present 5I Summarized in Table 3.
TS27: hippocampus stratum lucidum Present 5I Summarized in Table 3.
TS27: hippocampus stratum oriens Present 5I Summarized in Table 3.
TS27: hippocampus stratum radiatum Present 5I Summarized in Table 3.
TS27: hippocampus CA3 hippocampal pyramidal neuron Strong 5I
TS27: CA1 pyramidal cell layer Weak 5I
Specimen 7C1: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present Single cells 7C1 Expressed only in a few cells.
TS28: CA1 pyramidal cell layer Strong 7C1
TS28: hippocampus stratum radiatum Present 7C1
Specimen 7C2: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present Single cells 7C2 Expressed only in a few cells.
TS28: CA1 pyramidal cell layer Strong 7C2
TS28: hippocampus stratum radiatum Present 7C2
Specimen 7C3: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: CA3 pyramidal cell layer Strong 7C3
TS28: hippocampus stratum lucidum Present 7C3
Specimen 7C4: postnatal adult (more )
Structure Level Pattern Image Note
TS28: CA3 pyramidal cell layer Strong 7C4
TS28: hippocampus stratum lucidum Present 7C4
Specimen 7C5: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Weak 7C5
TS28: dentate gyrus hilus Present 7C5
Specimen 7C6: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Weak 7C6
TS28: dentate gyrus hilus Present 7C6
Specimen 8I: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum radiatum Present 8I
Specimen 10C1: embryonic day 14.0 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS22: cerebral cortex marginal layer Present 10C1
TS22: cerebral cortex subventricular zone Present 10C1
TS22: cerebral cortex ventricular layer Present 10C1
TS22: cerebral cortex intermediate zone Absent 10C1
TS22: cortical plate Absent 10C1
TS22: cortical subplate Absent 10C1
Specimen 10C2: embryonic day 16.0 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS24: cerebral cortex intermediate zone Present 10C2
TS24: cerebral cortex marginal layer Present 10C2
TS24: cerebral cortex subventricular zone Present 10C2
TS24: cerebral cortex ventricular layer Present 10C2
TS24: cortical plate Present 10C2
TS24: cortical subplate Absent 10C2
Specimen 10C3: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex ventricular layer Present 10C3
Specimen 10C4: postnatal day 1 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS27: cerebral cortex intermediate zone Absent 10C4
TS27: cortical layer I Present 10C4
TS27: cortical layer II Present 10C4
TS27: cortical layer III Present 10C4
TS27: cortical layer IV Present 10C4
TS27: cortical layer V Present 10C4
TS27: cortical layer VI Present 10C4
TS27: cortical subplate Present 10C4
Specimen 10C5: postnatal day 10 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS28: cortical layer I Present 10C5
TS28: cortical layer II Present 10C5
TS28: cortical layer III Present 10C5
TS28: cortical layer IV Present 10C5
TS28: cortical layer V Present 10C5
TS28: cortical layer VI Present 10C5
TS28: cortical subplate Present 10C5
TS28: cerebral hemisphere white matter Absent 10C5
Specimen 10C6: postnatal adult (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS28: cortical layer I Present 10C6 fairly low levels
TS28: cortical layer II Present 10C6 fairly low levels
TS28: cortical layer III Present 10C6 fairly low levels
TS28: cortical layer IV Present 10C6 fairly low levels
TS28: cortical layer V Present 10C6 fairly low levels
TS28: cortical layer VI Present 10C6 fairly low levels
TS28: cortical subplate Present 10C6 fairly low levels
TS28: cerebral hemisphere white matter Absent 10C6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory