About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:309436 Parish EV, et al., Expression of Barhl2 and its relationship with Pax6 expression in the forebrain of the mouse embryo. BMC Neurosci. 2016 Nov 25;17(1):76
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7461784
Gene symbol: Pax6
Gene name: paired box 6
Antibody: anti-Pax6
Detection system: Secondary antibody coupled to Alexa Fluor 488
Results
Specimen 6A-J: embryonic day 12.5 (more )
Note: Double labeled: green - Pax6; magenta - Barhl2 (assay MGI:7461456).
Structure Level Pattern Image Note
TS20: forebrain-midbrain boundary region Present Regionally restricted 6A Co-expressed with Barhl2 in the pretectum.
TS20: thalamus Present Graded 6C , 6I , 6E , 6G , 6A Cells closer to the pretectum had higher expression and co-expressed with Barhl2.
Specimen 6K/M: embryonic day 12.5 (more )
Note: Double labeled: green - Pax6; magenta - Barhl2 (assay MGI:7461456).
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 6M , 6K At the eminentia thalami area, Pax6-expressing and Barhl2-expressing cells are clearly segregated.
Specimen 7A/C: embryonic day 10.5 (more )
Note: Double labeled: green - Pax6; magenta - Barhl2 (assay MGI:7461456).
Structure Level Pattern Image Note
TS17: diencephalon Present Regionally restricted 7A , 7C In the thalamus, cells closer to the pretectum had higher expression and co-expressed with Barhl2. Expressed in prethalamus.
TS17: forebrain-midbrain boundary region Present Regionally restricted 7A , 7C Expressed in the pretectum.
Specimen 7D/F: embryonic day 11.5 (more )
Note: Double labeled: green - Pax6; magenta - Barhl2 (assay MGI:7461456).
Structure Level Pattern Image Note
TS19: diencephalon Present Graded 7F , 7D Expressed in the thalamus, cells closer to the pretectum had higher expression and co-expressed with Barhl2.
TS19: prethalamus Present 7F , 7D
TS19: forebrain-midbrain boundary region Present Regionally restricted 7D , 7F Expressed in the pretectum.
Specimen 7G/I: embryonic day 12.5 (more )
Note: Double labeled: green - Pax6; magenta - Barhl2 (assay MGI:7461456).
Structure Level Pattern Image Note
TS20: thalamus Present Graded 7I , 7G Cells closer to the pretectum had higher expression and co-expressed with Barhl2.
TS20: prethalamus Present 7G , 7I
TS20: forebrain-midbrain boundary region Present Regionally restricted 7G , 7I Expressed in the pretectum.
Specimen 7J/L: embryonic day 13.5 (more )
Note: Double labeled: green - Pax6; magenta - Barhl2 (assay MGI:7461456).
Structure Level Pattern Image Note
TS21: thalamus Weak 7L , 7J Very low expression.
TS21: prethalamus Present 7J , 7L
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory