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Gene Expression Data
Assay Details
Assay
Reference: J:329966 Bell CJ, et al., Borcs6 is required for endo-lysosomal degradation during early development. Mol Reprod Dev. 2022 Aug;89(8):337-350
Assay type: RNA in situ
MGI Accession ID: MGI:7398480
Gene symbol: T
Gene name: brachyury, T-box transcription factor T
Probe: Brachyury probe33
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 2g Ctrl1 (1): embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo Ambiguous 2g Ctrl1 (1)
Specimen 2g Ctrl1 (2): embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo Present Regionally restricted 2g Ctrl1 (2)
Specimen 2g Ctrl1 (3): embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo Strong Regionally restricted 2g Ctrl1 (3) Robust expression localized to presumptive posterior of embryo.
Specimen 2g Ctrl1 (4): embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo Strong Regionally restricted 2g Ctrl1 (4) Robust expression localized to presumptive posterior of embryo.
Specimen 2g Ctrl1 (5): embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo Strong Regionally restricted 2g Ctrl1 (5) Robust expression localized to presumptive posterior of embryo.
Specimen 2g Mut1 (1): embryonic day 6.5; Borcs6tm1.1(KOMP)Vlcg/Borcs6tm1.1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS9: embryo Present 2g Mut1 (1) Authors report variable expression level and disorganized localization of expression in consecutive sections.
Specimen 2g Mut1 (2): embryonic day 6.5; Borcs6tm1.1(KOMP)Vlcg/Borcs6tm1.1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS9: embryo Present 2g Mut1 (2) Authors report variable expression level and disorganized localization of expression in consecutive sections.
Specimen 2g Mut1 (3): embryonic day 6.5; Borcs6tm1.1(KOMP)Vlcg/Borcs6tm1.1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS9: embryo Present 2g Mut1 (3) Authors report variable expression level and disorganized localization of expression in consecutive sections.
Specimen 2g Mut1 (4): embryonic day 6.5; Borcs6tm1.1(KOMP)Vlcg/Borcs6tm1.1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS9: embryo Ambiguous 2g Mut1 (4) Authors report variable expression level and disorganized localization of expression in consecutive sections.
Specimen 2g Mut1 (5): embryonic day 6.5; Borcs6tm1.1(KOMP)Vlcg/Borcs6tm1.1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS9: embryo Present 2g Mut1 (5) Authors report variable expression level and disorganized localization of expression in consecutive sections.
Specimen 2g Mut2 (1): embryonic day 6.5; Borcs6tm1.1(KOMP)Vlcg/Borcs6tm1.1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS9: embryo Ambiguous 2g Mut2 (1) Authors report some embryos show no expression.
Specimen 2g Mut2 (2): embryonic day 6.5; Borcs6tm1.1(KOMP)Vlcg/Borcs6tm1.1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS9: embryo Ambiguous 2g Mut2 (2) Authors report some embryos show no expression.
Specimen 2g Mut2 (3): embryonic day 6.5; Borcs6tm1.1(KOMP)Vlcg/Borcs6tm1.1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS9: embryo Ambiguous 2g Mut2 (3) Authors report some embryos show no expression.
Specimen 2g Mut2 (4): embryonic day 6.5; Borcs6tm1.1(KOMP)Vlcg/Borcs6tm1.1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS9: embryo Ambiguous 2g Mut2 (4) Authors report some embryos show no expression.
Specimen 2g Mut2 (5): embryonic day 6.5; Borcs6tm1.1(KOMP)Vlcg/Borcs6tm1.1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS9: embryo Ambiguous 2g Mut2 (5) Authors report some embryos show no expression.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/28/2024
MGI 6.13 		The Jackson Laboratory