About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:143073 Fujieda H, et al., Retinoic acid receptor-related orphan receptor alpha regulates a subset of cone genes during mouse retinal development. J Neurochem. 2009 Jan;108(1):91-101
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7343642
Gene symbol: Rora
Gene name: RAR-related orphan receptor alpha
Antibody: anti-RORalpha (C-16) (sc-6062)
Detection system: Secondary antibody coupled to Alexa Fluor 568
Results
Specimen 1b: postnatal week 3 (more )
Structure Level Pattern Image Note
TS28: retina ganglion cell layer Very strong 1b Expression is nuclear.
TS28: retina inner nuclear layer Very strong 1b Expression is nuclear.
TS28: retina outer nuclear layer Present Regionally restricted 1b Expression is scattered along the outer margin of the outer nuclear layer and is weak throughout the layer.
Specimen 1d: postnatal week 3; Rorasg/Rorasg (more )
Structure Level Pattern Image Note
TS28: retina Absent 1d
Specimen 1e: postnatal (more )
Note: Double labeled: red - Rora; green - Opn1sw (assay MGI:7343651).
Structure Cell Type Level Pattern Image Note
TS28: photoreceptor layer retinal cone cell Present 1g , 1e
Specimen 1h: postnatal (more )
Note: Double labeled: red - Rora; green - Opn1mw (assay MGI:7343652).
Structure Cell Type Level Pattern Image Note
TS28: photoreceptor layer retinal cone cell Present 1h , 1j
Specimen 2a: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: retina layer Present Regionally restricted 2a Expression is in the developing ganglion cell layer and is absent in the neuroblastic layer.
Specimen 2b: postnatal day 3 (more )
Structure Cell Type Level Pattern Image Note
TS27: retina nuclear layer amacrine cell Present Regionally restricted 2b Expression is at the inner and outer border of the neuroblastic layer.
Specimen 2c: postnatal day 9 (more )
Structure Cell Type Level Pattern Image Note
TS28: retina inner nuclear layer cone retinal bipolar cell Weak Regionally restricted 2c Expression is in the outer half.
Specimen 2d: postnatal day 12 (more )
Structure Level Pattern Image Note
TS28: retina ganglion cell layer Present 2d
TS28: retina inner nuclear layer Present 2d
TS28: retina outer nuclear layer Present Regionally restricted 2d Expression is scattered along the outer margin of the outer nuclear layer and is weak throughout the layer.
Specimen 2e: postnatal day 3 (more )
Note: Double labeled: red - Rora; green - Opn1sw (assay MGI:7343651).
Structure Cell Type Level Pattern Image Note
TS27: photoreceptor layer retinal cone cell Present 2e , 2g
Specimen 2h: postnatal day 6 (more )
Note: Double labeled: red - Rora; green - Opn1sw (assay MGI:7343651).
Structure Cell Type Level Pattern Image Note
TS28: photoreceptor layer retinal cone cell Present 2h , 2j
Specimen not shown: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: retina Absent
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory