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Gene Expression Data
Assay Details
Assay
Reference: J:312046 Hirano K, et al., Single-neuron diversity generated by Protocadherin-beta cluster in mouse central and peripheral nervous systems. Front Mol Neurosci. 2012;5:90
Assay type: RNA in situ
MGI Accession ID: MGI:7311615
Gene symbol: Pcdhb
Gene name: protocadherin beta cluster
Probe: b12 HC probe (pan-Pcdh-beta probe)
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1B: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Strong 1B
TS28: hippocampus Strong 1B
TS28: main olfactory bulb Strong 1B

Specimen 2A: postnatal day 21 (more )
Structure Cell Type Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Purkinje cell Very strong 2A Expression is in most Purkinje cells.
TS28: cerebellum granule cell layer Present 2A

Specimen 2G: postnatal day 10 (more )
Structure Cell Type Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Purkinje cell Very strong 2G
TS28: cerebellum granule cell layer Present 2G

Specimen 2I: postnatal day 21 (more )
Structure Cell Type Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Purkinje cell Very strong 2I
TS28: cerebellum granule cell layer Present 2I

Specimen 2K: postnatal day 90 (more )
Structure Cell Type Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Purkinje cell Very strong 2K
TS28: cerebellum granule cell layer Weak 2K

Specimen 2M: postnatal day 150 (more )
Structure Cell Type Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Purkinje cell Very strong 2M
TS28: cerebellum granule cell layer Weak 2M

Specimen 6A: postnatal day 21 (more )
Structure Cell Type Level Pattern Image Note
TS28: CA1 pyramidal cell layer pyramidal neuron Very strong 6A , 6D
TS28: CA3 pyramidal cell layer pyramidal neuron Very strong 6A , 6G

Specimen 6J: postnatal day 21 (more )
Structure Cell Type Level Pattern Image Note
TS28: primary motor cortex neuron Very strong 6J , 6K

Specimen 6N: postnatal day 21 (more )
Structure Cell Type Level Pattern Image Note
TS28: visual cortex neuron Very strong 6O , 6N

Specimen 7A: embryonic day 17.5 (more )
Structure Cell Type Level Pattern Image Note
TS25: trigeminal ganglion neuron Present 7A Expression is in most neurons.

Specimen 7D: embryonic day 18.5 (more )
Structure Cell Type Level Pattern Image Note
TS26: dorsal root ganglion neuron Present 7D Expression is in most neurons.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory