Gene Expression Data
Assay Details
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Assay
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Reference:
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J:308927
Yoshida T, et al., Incoherent Feedforward Regulation via Sox9 and ERK Underpins Mouse Tracheal Cartilage Development. Front Cell Dev Biol. 2020;8:585640
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Assay type:
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In situ reporter (knock in)
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MGI Accession ID:
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MGI:7266449
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Gene symbol:
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Sox9
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Gene name:
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SRY (sex determining region Y)-box 9
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Reporter:
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GFP
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Direct Detection
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Results
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Specimen
2A E12.5:
(close  )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Sox9tm1Haak/Sox9tm1Haak
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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optical section
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Fixation:
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4% Paraformaldehyde
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Specimen
2A E13.5:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Sox9tm1Haak/Sox9tm1Haak
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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optical section
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Fixation:
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4% Paraformaldehyde
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Specimen
2A E14.5:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Sox9tm1Haak/Sox9tm1Haak
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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optical section
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Fixation:
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4% Paraformaldehyde
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Specimen
2A E15.5:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Sox9tm1Haak/Sox9tm1Haak
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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optical section
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Fixation:
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4% Paraformaldehyde
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Specimen
S1A:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Sox9tm1Haak/Sox9tm1Haak
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Age:
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embryonic day 14.0
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Sex:
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Not Specified
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Type:
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optical section
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Fixation:
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4% Paraformaldehyde
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Note:
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Double labeled: fire - Sox9; white - Cdh1 (assay MGI:7266444).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: trachea mesenchyme |
Present |
Regionally restricted |
S1A upper
,
S1A lower
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Expressed in the ventral region of the tracheal mesenchyme, where the tracheal cartilage rings are formed.
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Specimen
S1B:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Sox9tm1Haak/Sox9tm1Haak
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: trachea mesenchyme |
Present |
Regionally restricted |
S1B
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Expressed in the ventral region of the tracheal mesenchyme, where the tracheal cartilage rings are formed.
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Specimen
S1C:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Sox9tm1Haak/Sox9tm1Haak
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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optical section
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Fixation:
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4% Paraformaldehyde
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Note:
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Double labeled: green - Sox9; red - Sox9 (assay MGI:7266454).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: trachea mesenchyme |
Present |
Regionally restricted |
S1C EGFP
,
S1C merge
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Expressed in the ventral region of the tracheal mesenchyme, where the tracheal cartilage rings are formed.
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)
Analysis Tools