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Gene Expression Data
Assay Details
Assay
Reference: J:308106 Jang S, et al., Clmp Regulates AMPA and Kainate Receptor Responses in the Neonatal Hippocampal CA3 and Kainate Seizure Susceptibility in Mice. Front Synaptic Neurosci. 2020;12:567075
Assay type: RNA in situ
MGI Accession ID: MGI:6829694
Gene symbol: Slc17a6
Gene name: solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
Probe: Mm-Slc17a6 (319171)
Probe preparation: Antisense
Visualized with: Fluorescence
Assay notes: RNAscope assay using the C3 probe conjugated to Atto 647.
Results
Specimen 1C (upper): postnatal day 7 (more )
Note: Triple labeled: white - Slc17a6; red - Clmp (assay MGI:6829691); green - Slc17a7 (assay MGI:6829693). Also stained with DAPI (blue).
Structure Level Pattern Image Note
TS28: brain Present Regionally restricted 1C Whole brain Merge (upper) , 1C Whole brain (upper) , 1C Whole brain Vglut2 Expression is seen in glutamatergic neurons.
TS28: cerebral cortex Present Regionally restricted 1C CC deep layer Merge (upper) , 1C CC upper layer Merge (upper) , 1C CC deep layer Vglut2 , 1C CC upper layer Vglut2 , 1C Whole brain (upper) Expression is seen in glutamatergic neurons.
TS28: hippocampus CA3 Present Regionally restricted 1C CA3 Vglut2 , 1C CA3 Merge (upper) , 1C Whole brain (upper) Expression is seen in glutamatergic neurons.
TS28: dentate gyrus Present Regionally restricted 1C Whole brain (upper) , 1C DG Vglut2 , 1C DG Merge (upper) Expression is seen in glutamatergic neurons.
TS28: hippocampus CA1 Present Regionally restricted 1C CA1 Merge (upper) , 1C CA1 Vglut2 , 1C Whole brain (upper) Expression is seen in glutamatergic neurons.
Specimen S2A: postnatal day 56 (more )
Note: Triple labeled: white - Slc17a6; red - Clmp (assay MGI:6829691); green - Slc17a7 (assay MGI:6829693). Also stained with DAPI (blue).
Structure Level Pattern Image Note
TS28: brain Present Regionally restricted S2A Whole brain Merge , S2A Whole brain , S2A Whole brain Vglut2 Expression is seen in glutamatergic neurons.
TS28: cerebral cortex Present Regionally restricted S2A CC upper layer Merge , S2A Whole brain , S2A CC lower layer Merge , S2A CC upper layer Vglut2 , S2A CC lower layer Vglut2 Expression is seen in glutamatergic neurons.
TS28: hippocampus CA3 Present Regionally restricted S2A Whole brain , S2A CA3 Vglut2 , S2A CA3 Merge Expression is seen in glutamatergic neurons.
TS28: dentate gyrus Present Regionally restricted S2A DG Merge , S2A Whole brain , S2A DG Vglut2 Expression is seen in glutamatergic neurons.
TS28: hippocampus CA1 Present Regionally restricted S2A CA1 Vglut2 , S2A Whole brain , S2A CA1 Merge Expression is seen in glutamatergic neurons.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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