Gene Expression Data
Assay Details
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Assay
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Reference:
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J:294771
Lantz B, et al., Finding the Unicorn, a New Mouse Model of Midfacial Clefting. Genes (Basel). 2020 Jan 11;11(1)
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6467000
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Gene symbol:
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Gli1
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Gene name:
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GLI-Kruppel family member GLI1
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Probe:
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Gli1 probe42
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Probe preparation:
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labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
4D:
embryonic day 12.5
(more  )
Specimen
4D:
(close  )
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Genetic Background:
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involves: C57BL/6J
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: nasal septum mesenchyme |
Present |
Regionally restricted |
4D
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Expression surrounds Sox9-expressing regions in both control and mutant embryos.
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Specimen
4H:
(close )
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Genetic Background:
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involves: C57BL/6J
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Mutant Allele(s):
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b2b1941Clo/b2b1941Clo
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
7B:
embryonic day 11.5
(more )
Specimen
7B:
(close )
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Genetic Background:
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involves: C57BL/6J
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
7F:
(close )
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Genetic Background:
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involves: C57BL/6J
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Mutant Allele(s):
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b2b1941Clo/b2b1941Clo
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: nasal process |
Present |
Regionally restricted |
7F
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Expression domain shifted caudally and laterally compared to control embryo.
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Analysis Tools