Gene Expression Data
Assay Details
Assay
|
Reference:
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J:33667
Takahashi Y, Organization of the spina bifida neural tube in Splotch (Pax-3 defective) mouse embryos. Dev Growth Differ. 1996 FEB;38(1):23-31
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6381671
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Gene symbol:
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Msx2
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Gene name:
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msh homeobox 2
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Probe:
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pI22AR.3
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
1A:
embryonic day 8.5
(more )
Specimen
1A:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
1B:
embryonic day 9.5
(more )
Specimen
1B:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: neural tube |
Present |
Regionally restricted |
1B
|
Expressed in the dorsal portion extending along the anteroposterior axis to the mesencephalon.
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TS15: future hindbrain |
Present |
Regionally restricted |
1B
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Expressed in the dorsolateral portion of the neuroepithelium.
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Specimen
1C:
embryonic day 10.5
(more )
Specimen
1C:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: brain |
Present |
Regionally restricted |
1C
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Expression in the dorsal midline extended rostoral to the border between the diencephalon and telencephalon.
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TS17: brain ventricle |
Present |
Regionally restricted |
1C
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Expressed in the medial portions of the telencephalic ventricles.
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Specimen
1D:
embryonic day 10.5
(more )
Specimen
1D:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: neural tube |
Present |
Regionally restricted |
1D
|
Expressed in the dorsal portion extending along the anteroposterior axis to the mesencephalon.
|
TS17: hindbrain |
Present |
Regionally restricted |
1D
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Expressed in the dorsolateral portion of the neuroepithelium.
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Specimen
1E:
embryonic day 12.5
(more )
Note: transverse slice
Specimen
1E:
(close )
Genetic Background:
|
C57BL/6J
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Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
transverse slice
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Specimen
2A:
embryonic day 11.5
(more )
Note: transverse slice
Specimen
2A:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
transverse slice
|
Specimen
2C:
embryonic day 11.5
(more )
Specimen
2C:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: head mesenchyme |
Present |
Regionally restricted |
2C
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Expressed in the dorsal region.
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TS19: metencephalon |
Present |
Regionally restricted |
2C
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Expressed in the dorsal midline. The border of the positive and negative areas coincided with the presumptive sulcus limitaus.
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Specimen
2D:
embryonic day 11.5
(more )
Specimen
2D:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3A:
embryonic day 11.5; Pax3Sp/ Pax3Sp
(more )
Note: exencephalic metencephalon
Specimen
3A:
(close )
Genetic Background:
|
involves: C57BL * C57BL/6J
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Mutant Allele(s):
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Pax3Sp/Pax3Sp
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Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
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Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
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exencephalic metencephalon
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Specimen
3B:
embryonic day 11.5; Pax3Sp/ Pax3Sp
(more )
Note: transverse slice of the trunk at the level of the forelimb bud
Specimen
3B:
(close )
Genetic Background:
|
involves: C57BL * C57BL/6J
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Mutant Allele(s):
|
Pax3Sp/Pax3Sp
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Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
transverse slice of the trunk at the level of the forelimb bud
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Specimen
3C:
embryonic day 11.5; Pax3Sp/ Pax3Sp
(more )
Note: caudal spina bifida
Specimen
3C:
(close )
Genetic Background:
|
involves: C57BL * C57BL/6J
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Mutant Allele(s):
|
Pax3Sp/Pax3Sp
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Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
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Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
caudal spina bifida
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: future spinal cord |
Present |
Regionally restricted |
3C
|
Barely detected in the caudal spina bifida region.
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Specimen
4a Sp/Sp:
embryonic day 11.5; Pax3Sp/ Pax3Sp
(more )
Note: transverse slice
Specimen
4a Sp/Sp:
(close )
Genetic Background:
|
involves: C57BL * C57BL/6J
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Mutant Allele(s):
|
Pax3Sp/Pax3Sp
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
transverse slice
|
Specimen
4a Normal:
embryonic day 11.5
(more )
Note: transverse slice
Specimen
4a Normal:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
transverse slice
|
Specimen
not shown:
embryonic day 11.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: diencephalon |
Present |
Regionally restricted |
|
Expressed in the dorsal midline.
|
TS19: midbrain |
Present |
Regionally restricted |
|
Expressed in the dorsal midline.
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Specimen
not shown:
embryonic day 12.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
not shown:
embryonic day 11.5; Pax3Sp/ Pax3Sp
(more )
Specimen
not shown:
(close )
Genetic Background:
|
involves: C57BL * C57BL/6J
|
Mutant Allele(s):
|
Pax3Sp/Pax3Sp
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: metencephalon |
Present |
Regionally restricted |
|
Expressed in the most dorsolateral portion of the open metencephalon, where neuroepithelial cells were adjacent to the skin ectoderm.
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