About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:149237 Perez-Balaguer A, et al., Shh dependent and independent maintenance of basal midbrain. Mech Dev. 2009 May-Jun;126(5-6):301-13
Assay type: RNA in situ
MGI Accession ID: MGI:6304428
Gene symbol: Gli1
Gene name: GLI-Kruppel family member GLI1
Probe: Gli1 probe34
Probe preparation: Antisense RNA
Results
Specimen 2C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: midbrain Strong Regionally restricted 2C Expression was detected in two patches close to the dorsal limit of the Shh-positive domain, which was in the floor plate and basal plate.

Specimen 2I: embryonic day 12.5; Shhtm2Amc/Shhtm2Amc, En1tm2(cre)Wrst/En1+ (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS20: midbrain Trace Regionally restricted 2I In the conditional mutant, expression was almost absent.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/30/2025
MGI 6.24
The Jackson Laboratory