Gene Expression Data
Assay Details
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Assay
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Reference:
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J:185807
Nowotschin S, et al., Interaction of Wnt3a, Msgn1 and Tbx6 in neural versus paraxial mesoderm lineage commitment and paraxial mesoderm differentiation in the mouse embryo. Dev Biol. 2012 Jul 1;367(1):1-14
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|
Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6287740
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Gene symbol:
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Wnt3a
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Gene name:
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wingless-type MMTV integration site family, member 3A
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Results
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Specimen
2A:
embryonic day 7.0
(more  )
Note: early bud stage
Specimen
2A:
(close  )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
early bud stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: primitive streak |
Present |
|
2A
|
Expression restricted to posterior side of embryo in vicinity of primitive streak.
|
Specimen
2B:
embryonic day 7.5
(more )
Note: late bud stage
Specimen
2B:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
late bud stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS11: primitive streak |
Present |
|
2B
|
Expression restricted to posterior side of embryo in vicinity of primitive streak.
|
Specimen
2C1:
embryonic day 7.5
(more )
Note: head fold stage
Specimen
2C1:
(close )
|
Genetic Background:
|
Not Specified
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|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
head fold stage
|
Specimen
2C2:
embryonic day 7.5
(more )
Note: head fold stage
Specimen
2C2:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
head fold stage
|
Specimen
2C3:
embryonic day 7.5
(more )
Note: head fold stage
Specimen
2C3:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
head fold stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS11: primitive streak |
Present |
Regionally restricted |
2C3
|
Authors report expression in epiblast cells surrounding the site of cell ingression.
|
Specimen
2C4:
embryonic day 7.5
(more )
Note: head fold stage
Specimen
2C4:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
head fold stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS11: embryo mesoderm |
Present |
Regionally restricted |
2C4
|
Expression maintained in recently ingressed cell located posteriorly/dorsally in presomitic mesoderm.
|
Specimen
2J1:
embryonic day 8.0
(more )
Note: 3-4 somite stage
Specimen
2J1:
(close )
|
Genetic Background:
|
Not Specified
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|
Age:
|
embryonic day 8.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
3-4 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS12: primitive streak |
Present |
|
2J1
|
Expression in primitive streak and presomitic mesoderm maintained up until late somite (>19 somite) stages.
|
| TS12: unsegmented mesenchyme |
Present |
|
2J1
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Expression in primitive streak and presomitic mesoderm maintained up until late somite (>19 somite) stages.
|
Specimen
2J2:
embryonic day 8.0
(more )
Note: 3-4 somite stage
Specimen
2J2:
(close )
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Genetic Background:
|
Not Specified
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Age:
|
embryonic day 8.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
3-4 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS12: primitive streak |
Present |
|
2J2
|
Expression in primitive streak and presomitic mesoderm maintained up until late somite (>19 somite) stages.
|
| TS12: unsegmented mesenchyme |
Present |
|
2J2
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Expression in primitive streak and presomitic mesoderm maintained up until late somite (>19 somite) stages.
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Specimen
2K1:
embryonic day 8.5
(more )
Note: 8-9 somite stage
Specimen
2K1:
(close )
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Genetic Background:
|
Not Specified
|
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Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
8-9 somite stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: trunk somite |
Absent |
|
2K1
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Expression limited to caudal end of presomitic mesoderm.
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Specimen
2K2:
embryonic day 8.5
(more )
Note: 8-9 somite stage
Specimen
2K2:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
8-9 somite stage
|
Specimen
2K3:
embryonic day 8.5
(more )
Note: 8-9 somite stage
Specimen
2K3:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
8-9 somite stage
|
Specimen
2L1:
embryonic day 9.0
(more )
Note: 19 somite stage
Specimen
2L1:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 9.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
19 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS14: unsegmented mesenchyme |
Present |
|
2L1
|
Expression in primitive streak and presomitic mesoderm maintained up until late somite (>19 somite) stages
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Specimen
2L2:
embryonic day 9.0
(more )
Note: 19 somite stage
Specimen
2L2:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 9.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
19 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS14: unsegmented mesenchyme |
Present |
Regionally restricted |
2L2
|
Expression restricted to most posterior part of tail region.
|
Specimen
2L3:
embryonic day 9.0
(more )
Note: 19 somite stage
Specimen
2L3:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 9.0
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
19 somite stage
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Specimen
5A1:
embryonic day 8.5
(more )
Note: 10-12 somite stage
Specimen
5A1:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo |
Present |
|
5A1
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Expression in cells of neural plate, primitive streak and tail region.
|
Specimen
5A2:
embryonic day 8.5
(more )
Note: 10-12 somite stage
Specimen
5A2:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo |
Present |
Regionally restricted |
5A2
|
Expression in cells of neural plate, primitive streak and tail region.
|
Specimen
5A3:
embryonic day 8.5
(more )
Note: 10-12 somite stage
Specimen
5A3:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
Specimen
5A4:
embryonic day 8.5
(more )
Note: 10-12 somite stage
Specimen
5A4:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
Specimen
5F1:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * C57BL/6
|
|
Mutant Allele(s):
|
Msgn1tm1Wb/Msgn1tm1Wb
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo |
Strong |
|
5F1
|
Authors report upregulation of expression.
|
Specimen
5F2:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * C57BL/6
|
|
Mutant Allele(s):
|
Msgn1tm1Wb/Msgn1tm1Wb
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo |
Strong |
|
5F2
|
Authors report upregulation of expression.
|
Specimen
5H1:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ
|
|
Mutant Allele(s):
|
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo |
Strong |
|
5H1
|
Authors report upregulation of expression.
|
Specimen
5H2:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ
|
|
Mutant Allele(s):
|
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
Specimen
5H3:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ
|
|
Mutant Allele(s):
|
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
Specimen
5H4:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ
|
|
Mutant Allele(s):
|
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo mesoderm |
Strong |
Regionally restricted |
5H4
|
Authors report upregulation of expression in areas of expanded tail region.
|
Specimen
5J1:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
|
|
Mutant Allele(s):
|
Msgn1tm1Wb/Msgn1tm1Wb
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo |
Present |
Regionally restricted |
5J1
|
Ectopic expression in tail region and neural tube.
|
Specimen
5J2:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
|
|
Mutant Allele(s):
|
Msgn1tm1Wb/Msgn1tm1Wb
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo |
Present |
Regionally restricted |
5J2
|
Ectopic expression in tail region and neural tube.
|
Specimen
5J3:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
|
|
Mutant Allele(s):
|
Msgn1tm1Wb/Msgn1tm1Wb
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: neural tube |
Strong |
Widespread |
5J3
|
Authors report overexpression along entire neural tube.
|
Specimen
5J4:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
|
|
Mutant Allele(s):
|
Msgn1tm1Wb/Msgn1tm1Wb
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo |
Strong |
Regionally restricted |
5J4
|
Authors report upregulation of expression in areas of expanded tail region.
|
Specimen
5J5:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
|
|
Mutant Allele(s):
|
Msgn1tm1Wb/Msgn1tm1Wb
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo |
Strong |
Regionally restricted |
5J5
|
Authors report upregulation of expression in areas of expanded tail region.
|
Specimen
5J6:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
|
|
Mutant Allele(s):
|
Msgn1tm1Wb/Msgn1tm1Wb
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 8.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
10-12 somite stage
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: neural tube |
Present |
Regionally restricted |
5J6
|
Expression in cell accumulations close to the neural tube.
|
Specimen
S3A:
embryonic day 7.5
(more )
Note: head fold stage
Specimen
S3A:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
head fold stage
|
Specimen
S3F:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * C57BL/6
|
|
Mutant Allele(s):
|
Msgn1tm1Wb/Msgn1tm1Wb
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
head fold stage
|
Specimen
S3H:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ
|
|
Mutant Allele(s):
|
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
head fold stage
|
Specimen
S3J:
(close )
|
Genetic Background:
|
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
|
|
Mutant Allele(s):
|
Msgn1tm1Wb/Msgn1tm1Wb
Tbx6tm2Pa/Tbx6tm2Pa
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
head fold stage
|
|
Analysis Tools