Gene Expression Data
Assay Details
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Assay
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Reference:
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J:174477
Abellan A, et al., Differential expression of LIM-homeodomain factors in Cajal-Retzius cells of primates, rodents, and birds. Cereb Cortex. 2010 Aug;20(8):1788-98
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6281598
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Gene symbol:
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Lhx1
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Gene name:
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LIM homeobox protein 1
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Probe:
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Lhx1 cDNA11
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
1A:
embryonic day 13.5
(more  )
Specimen
1A:
(close  )
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Genetic Background:
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Swiss
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS21: cerebral cortex marginal layer |
Present |
Regionally restricted |
1A
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Expressed in the medial to dorsal and ventral aspects of the marginal zone of the cortical wall.
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Specimen
1B:
embryonic day 13.5
(more )
Specimen
1B:
(close )
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Genetic Background:
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Swiss
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS21: cerebral cortex marginal layer |
Present |
Regionally restricted |
1B
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Expressed in the medial to dorsal and ventral aspects of the marginal zone of the cortical wall.
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| TS21: forebrain |
Present |
Regionally restricted |
1B
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Expressed in the eminentia thalami.
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Specimen
1C:
embryonic day 12.5
(more )
Specimen
1C:
(close )
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Genetic Background:
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Swiss
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex marginal layer |
Present |
Regionally restricted |
1C
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Expressed in the medial to dorsal and ventral aspects of the marginal zone of the cortical wall. Also expressed in the marginal part of the cortical hem.
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| TS20: forebrain |
Present |
Regionally restricted |
1C
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Expressed in the eminentia thalami.
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Specimen
1D:
embryonic day 14.5
(more )
Specimen
1D:
(close )
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Genetic Background:
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Swiss
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: cerebral cortex marginal layer |
Present |
Regionally restricted |
1D
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Expressed in the medial and ventral aspects of the marginal zone of the cortical wall. Not expressed in the dorsal part.
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| TS22: forebrain |
Present |
Regionally restricted |
1D
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Expressed in the eminentia thalami.
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Specimen
1E/E":
embryonic day 11.5
(more )
Note: Double labeled: blue - Lhx1; green - Reln (assay MGI:6281681).
Specimen
1E/E":
(close )
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Genetic Background:
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Swiss
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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Double labeled: blue - Lhx1; green - Reln (assay MGI:6281681).
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Specimen
1F/F":
embryonic day 13.5
(more )
Note: Double labeled: blue - Lhx1; green - Reln (assay MGI:6281681).
Specimen
1F/F":
(close )
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Genetic Background:
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Swiss
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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Double labeled: blue - Lhx1; green - Reln (assay MGI:6281681).
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Specimen
not shown:
embryonic day 15.5
(more )
Specimen
not shown:
(close )
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Genetic Background:
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Swiss
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: cerebral cortex marginal layer |
Present |
Regionally restricted |
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Expressed in the medial and ventral aspects of the marginal zone of the cortical wall. Not expressed in the dorsal part.
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| TS23: forebrain |
Present |
Regionally restricted |
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Expressed in the eminentia thalami.
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Analysis Tools