Pax1 RNA in situ Gene Expression Assay

Gene Expression Data
Assay Details

Assay

Reference:	J:95019 Manley NR, et al., Abnormalities of caudal pharyngeal pouch development in Pbx1 knockout mice mimic loss of Hox3 paralogs. Dev Biol. 2004 Dec 15;276(2):301-12
Assay type:	RNA in situ
MGI Accession ID:	MGI:6148020
Gene symbol:	Pax1
Gene name:	paired box 1

Probe:	Pax1 probe3
Probe preparation:	Antisense labelled with digoxigenin RNA
Visualized with:	Alkaline phosphatase

Results

6A ©

Specimen 6A: embryonic day 9.5 (more

)

Structure	Level	Image
TS15: 1st branchial pouch	Present	6A
TS15: 2nd branchial pouch	Present	6A
TS15: 3rd branchial pouch	Present	6A

6B ©

Specimen 6B: embryonic day 9.5; Pbx1^tm1Mlc/Pbx1^tm1Mlc (more

)

Structure	Level	Image	Note
TS15: 1st branchial pouch	Present	6B
TS15: 2nd branchial pouch	Present	6B
TS15: 3rd branchial pouch	Absent	6B	No expression where third pouch should form.

6C ©

Specimen 6C: embryonic day 10.5 (more

)

Structure	Level	Image
TS17: 1st branchial pouch	Present	6C
TS17: 2nd branchial pouch	Present	6C
TS17: 3rd branchial pouch	Present	6C
TS17: 4th branchial pouch	Present	6C

6D ©

Specimen 6D: embryonic day 10.5; Pbx1^tm1Mlc/Pbx1^tm1Mlc (more

)

Structure	Level	Image	Note
TS17: 1st branchial pouch	Present	6D
TS17: 2nd branchial pouch	Present	6D
TS17: 3rd branchial pouch	Present	6D
TS17: 4th branchial pouch	Absent	6D	No expression in fourth pouch.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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