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Gene Expression Data
Assay Details
Assay
Reference: J:18442 Herrera VL, et al., Developmental cell-specific regulation of Na(+)-K(+)-ATPase alpha 1-, alpha 2-, and alpha 3-isoform gene expression. Am J Physiol. 1994 May;266(5 Pt 1):C1301-12
Assay type: RNA in situ
MGI Accession ID: MGI:5909920
Gene symbol: Atp1a3
Gene name: ATPase, Na+/K+ transporting, alpha 3 polypeptide
Probe: alpha3 cDNA
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Probes were hydrolyzed to about 70 nucleotides.
Results
Specimen 2C: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: brain Present Regionally restricted 2C Expression is ventral to the ventricle and is diffuse in other areas of the brain.
TS24: brain meninges Absent 2C
TS24: nasopharynx epithelium Absent 2C
Specimen 2F: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: small intestine Weak 2F
Specimen 3E: embryonic day 9.5 (more )
Note: (F) is a higher magnification of the boxed area in (E).
Structure Level Pattern Image Note
TS15: neural tube Present 3E , 3F
TS15: heart Absent 3E , 3F
Specimen 4E: embryonic day 10.5 (more )
Note: (F) is a higher magnification of the heart in (E).
Structure Level Pattern Image Note
TS17: brain Strong 4E
TS17: neural tube Strong 4E
TS17: ganglion Present 4E , 4F
TS17: heart Present 4E , 4F
Specimen 5F: embryonic day 10.5 (more )
Note: Boxed regions in (F) correspond to panels (A-E).
Structure Level Pattern Image Note
TS17: midbrain marginal layer Present Regionally restricted 5F , 5A Expression is in a group of cells in the ventral region.
TS17: eye Present Regionally restricted 5F , 5B Expression is at the base of the optic chiasma.
TS17: cranial ganglion Present 5C , 5F
TS17: spinal ganglion Present 5F , 5D
TS17: neural tube lateral wall Present Regionally restricted 5E , 5F Expression is in the ventral horn.
Specimen 6A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon marginal layer Present Regionally restricted 6A Expression is in the outer marginal cells.
TS17: optic stalk Present Regionally restricted 6A Expression is at the base,
TS17: midbrain Present Regionally restricted 6A Expression is ventral and dorsal.
TS17: hindbrain Present Regionally restricted 6A Expression is ventral and dorsal in the myelencephalon.
TS17: future spinal cord Present Regionally restricted 6A Expression is ventral and dorsal.
Specimen 6B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: midbrain Present 6B
TS17: hindbrain Present Regionally restricted 6B Expression is in the myelencephalon.
Specimen 6C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Present Regionally restricted 6C Expression is in the outer marginal cells.
TS17: midbrain marginal layer Present Regionally restricted 6C Expression is in the outer marginal cells.
TS17: telencephalon marginal layer Present Regionally restricted 6C Expression is in the outer marginal cells.
TS17: hindbrain Present Regionally restricted 6C Expression is in the outer marginal cells of the myelencephalon and the metencephalon.
TS17: midbrain-hindbrain junction Present
Specimen 7M: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: spinal cord Present Non-Uniform 7M There is variegated expression.
TS24: spinal ganglion Present 7M
Specimen 7N: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: spinal ganglion Strong 7N
Specimen 7S: embryonic day 16.5 (more )
Note: (T) is a higher magnification of the boxed area in (S).
Structure Level Pattern Image Note
TS24: cerebellum Present Regionally restricted 7S Expression is in a variegated pattern.
TS24: metencephalon Present Regionally restricted 7S Expression is in a variegated pattern.
TS24: medulla oblongata Present Regionally restricted 7T , 7S Expression is in a variegated pattern.
TS24: cerebellum granule cell layer Present Regionally restricted 7S Expression is at the outer margins.
TS24: cerebellum Purkinje cell cluster Present 7S
TS24: 4th ventricle choroid plexus Absent 7S , 7T
Specimen 7W: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: neocortex Strong Regionally restricted 7W Expression is stronger in the outer cell layers.
TS24: cerebral cortex Strong 7W
Specimen 7X: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: midbrain Strong Uniform 7X
TS24: cerebral aqueduct Present 7X
Specimen 8E: embryonic day 16.5 (more )
Note: (F) is a higher magnification of (D).
Structure Level Pattern Image Note
TS24: trabeculae carneae Present 8F , 8E
TS24: ventricle cardiac muscle Present 8F , 8E
TS24: atrium cardiac muscle Present 8E
TS24: trachea Present 8E
Specimen not shown: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: spinal cord ventral horn Present
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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