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Gene Expression Data
Assay Details
Assay
Reference: J:36589 Jen Y, et al., Expression patterns of Id1, Id2, and Id3 are highly related but distinct from that of Id4 during mouse embryogenesis. Dev Dyn. 1996 Nov;207(3):235-52
Assay type: RNA in situ
MGI Accession ID: MGI:5906233
Gene symbol: Id3
Gene name: inhibitor of DNA binding 3
Probe: pBS/KS-Id3sp
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: 1st branchial arch Present 1_panel 3
TS19: Rathke's pouch Present 1_panel 3
TS19: somite Present 1_panel 3
TS19: trunk mesenchyme Present Regionally restricted 1_panel 3 Expression is in mesenchyme surrounding the dorsal side of the developing stomach.

Specimen 2D: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: sclerotome Present Regionally restricted 2D Expression is in the rostral half of the sclerotome.

Specimen 2I: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: forelimb digit Present Regionally restricted 2I Expression is in the hypertrophic cartilage region and in the bony diaphysis.
TS24: radius Present Regionally restricted 2I Expression is in the hypertrophic cartilage region and in the bony diaphysis.

Specimen 2N: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cranium Present Regionally restricted 2N Expression is in the cranio-facial skeleton.
TS22: jaw skeleton Present Regionally restricted 2N Expression is in the cranio-facial skeleton.
TS22: palatal shelf Present Regionally restricted 2N Expression is in ossification centers.
TS22: Meckel's cartilage Present 2N
TS22: hyoid cartilage primordium Present 2N
TS22: nasal septum Present 2N
TS22: otic capsule Present 2N
TS22: sphenoid bone Present 2N

Specimen 2S: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: hindlimb interdigital region mesenchyme Present 2S
TS20: hindlimb pre-cartilage condensation Present Regionally restricted 2S Expression is in the blastemal condenstaions where chondrification has started.

Specimen 3: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: dental papilla Present Regionally restricted 3_panel 3 Expression is in the dental papilla mesenchyme and is absent in the ondontoblasts.
TS24: enamel organ Present Regionally restricted 3_panel 3 Expression is in the ameloblast layer.
TS24: stellate reticulum Present 3_panel 3

Specimen 5C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: stomach Present Regionally restricted 5C Expression is in the stomach endoderm in the dorsal part.
TS19: stomach mesenchyme Present Regionally restricted 5C Expression is in mesenchyme surrounding the endoderm in the dorsal part.

Specimen 5H: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: intestine muscularis Present 5H
TS22: intestine mesenchyme Present Regionally restricted 5H Expression is in mesenchymal cells adjacent to the epithelium.

Specimen 6B/E: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: lung mesenchyme Present Regionally restricted 6B/E Expression is in the mesenchymal cells surrounding the main bronchi and the smaller bronchi/bronchioles.

Specimen 6H/K: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: metanephros Present Regionally restricted 6H/K Expression is in the condensed metanephric mesenchyme.
TS22: collecting duct Present 6H/K
TS22: glomerular capillary system of maturing glomerular tuft Present 6H/K

Specimen 7: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: endocardial cushion Strong 7_panel 3
TS19: atrioventricular endocardial cushion Moderate 7_panel 3
TS19: outflow tract Moderate 7_panel 3

Specimen 8C/G: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hyaloid vascular plexus Present Regionally restricted 8C/G

Specimen 9C/G: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: salivary gland mesenchyme Present Regionally restricted 9C/G Expression is in the mesenchymal cells surrounding the epithelium in the developing salivary gland.

Specimen 9I/J: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: thyroid gland Present 9I/J
TS24: parathyroid gland Absent 9I/J

Specimen not shown 8.5: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future brain neural fold Present Regionally restricted Expression is in the ridges of the unclosed neural folds.
TS13: head mesenchyme Present Regionally restricted Expression is in the cranial mesenchyme underlying the unclosed neural folds.

Specimen not shown E9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch Present
TS15: limb Present
TS15: trunk mesenchyme Very strong Regionally restricted Expression is in the mesechyme surrounding the dorsal aorta.

Specimen not shown E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: limb Present
TS17: stomach mesenchyme Present Regionally restricted Expression is in mesenchyme surrounding the endoderm in the dorsal part.
TS17: stomach Present Regionally restricted Expression is in the stomach endoderm in the dorsal part.
TS17: hindgut mesenchyme Present Regionally restricted Expression is in the mesenchyme surrounding the gut epithelium.
TS17: midgut mesenchyme Present Regionally restricted Expression is in the mesenchyme surrounding the gut epithelium.
TS17: trunk mesenchyme Very strong Regionally restricted Expression is in the mesechyme surrounding the dorsal aorta.

Specimen not shown E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: brain blood vessel Present Regionally restricted Expression is in the blood vessels of the meninges.
TS19: stomach Present Regionally restricted Expression is in the stomach endoderm in the dorsal part.
TS19: stomach mesenchyme Present Regionally restricted Expression is in mesenchyme surrounding the endoderm in the dorsal part. `
TS19: nasal process Present
TS19: stomach epithelium Present

Specimen not shown E12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: rib pre-cartilage condensation Present Regionally restricted Expression is in the perichondrium.
TS20: jaw Present Regionally restricted Expression is in a patch of toothbud epithelium and is weak in the condensed mesenchymal cells.
TS20: vibrissa mesenchyme Present Regionally restricted Expression is in the condensing mesenchyme underneath the epidermal placodes.
TS20: metanephros Present Regionally restricted Expression is in the condensed metanephric mesenchyme and renal pelvis, absent in the ureteric bud.
TS20: pancreas Present

Specimen not shown E14.5 Tooth: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: inner enamel epithelium Very strong
TS22: outer enamel epithelium Very strong
TS22: stellate reticulum Very strong
TS22: tooth mesenchyme Very strong Regionally restricted Expression is in the condensed mesenchyme.
TS22: cap stage tooth Very strong Regionally restricted

Specimen not shown E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: stomach mesenchyme Present
TS22: stomach glandular region Present Regionally restricted Expression is in the glandular mucosa.
TS22: stomach epithelium Weak

Specimen not shown E16.5: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: brain blood vessel Present
TS24: collecting duct Present
TS24: glomerular capillary system of maturing glomerular tuft Present
TS24: heart valve Present
TS24: mesenchyme of metanephros Present
TS24: renal pelvis Present
TS24: vibrissa dermal papilla Weak
TS24: vibrissa outer root sheath Weak
TS24: vibrissa dermal component Weak Regionally restricted Expression is in the dermal sheath region.
TS24: intestine Trace


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory