Gene Expression Data
Assay Details
Assay
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Reference:
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J:14524
Clauss IM, et al., In situ hybridization studies suggest a role for the basic region-leucine zipper protein hXBP-1 in exocrine gland and skeletal development during mouse embryogenesis. Dev Dyn. 1993 Jun;197(2):146-56
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5816635
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Gene symbol:
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Xbp1
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Gene name:
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X-box binding protein 1
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Probe:
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hXBP-1 probe1
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Assay notes:
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Specimens were embedded in paraffin or processed for cryosectioning; authors did not specify which. Authors report that 3 different antisense probes were used which resulted in similar intensity and patterns of hybridization.
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Results
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Specimen
1A:
embryonic day 11.5
(more )
Specimen
1A:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
1C:
embryonic day 12.5
(more )
Specimen
1C:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Structure |
Level |
Pattern |
Image |
Note |
TS20: skeleton |
Present |
Regionally restricted |
1C
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Expression at sites of intramembranous bone formation including frontal bone of calvaria, and maxillary and mandibular bones.
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TS20: pectoral-thoracic pre-cartilage condensation |
Present |
Regionally restricted |
1C
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Expression in intramembranous bone of clavicle.
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TS20: chondrocranium |
Present |
Regionally restricted |
1C
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Expression in intramembranous bone of calvaria.
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TS20: jaw bone |
Present |
Regionally restricted |
1C
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Expression in intramembranous bone of mandible.
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Specimen
1D:
embryonic day 12.5
(more )
Specimen
1D:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: chondrocranium |
Present |
Regionally restricted |
1D
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In calvaria, expression in preosteoblasts and osteoblasts, particularly at sites where new bone is being actively deposited.
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Specimen
1E:
embryonic day 14.5
(more )
Specimen
1E:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: rib cartilage condensation |
Strong |
Regionally restricted |
1E
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Very high levels of expression in osteoblasts and preosteoblasts derived from osteoprogenitor cells of the periosteum forming the primary center of ossification of the outer bony outer periosteal cortex of cartilaginous ribs.
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Specimen
1F/G:
embryonic day 13.5
(more )
Specimen
1F/G:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: skeleton |
Present |
Regionally restricted |
1F/G
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Expression in an increasing number of sites of ossification, notably the bony diaphysis (bony periosteal cuff) of the midportion of long bones.
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TS21: humerus cartilage condensation |
Present |
Regionally restricted |
1F/G
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Expression in preosteoblasts and osteoblasts of the newly forming diaphyses of the developing humerus. Lower expression in matrix secreting chondroblasts of the growth cartilage of the mature zone. Little if any expression in cartilage cells of hypertrophic zone.
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Specimen
1H:
embryonic day 16.5
(more )
Specimen
1H:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: upper jaw incisor |
Present |
Regionally restricted |
1H
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Significant levels of expression in osteoblasts and preosteoblasts of fine cancellous bone of maxilla corresponding to the zone of recently new bone. Expression much lower or absent in osteoblasts of older and more mature bone.
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Specimen
1I/J:
embryonic day 16.5
(more )
Specimen
1I/J:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: femur |
Present |
Regionally restricted |
1I/J
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Expression in mature zone of growth cartilage. Strong expression in periosteal preosteoblasts and osteoblasts actively forming new diaphyseal bone. Expression in cartilage limited principally to the matrix producing cells of mature zone of growth cartilage.
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TS24: tibia |
Present |
Regionally restricted |
1I/J
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Expression in mature zone of growth cartilage. Strong expression in periosteal preosteoblasts and osteoblasts actively forming new diaphyseal bone. Expression in cartilage limited principally to the matrix producing cells of mature zone of growth cartilage.
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Specimen
1K/L:
embryonic day 18.5
(more )
Specimen
1K/L:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Structure |
Level |
Pattern |
Image |
Note |
TS26: femur |
Present |
Regionally restricted |
1K/L
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Expression in bony diaphysis formed by perichondral derived osteoblasts. Strong expression in osteoblasts and preosteoblasts in epiphyseal region just below resorbing degenerative zones of growth cartilage where osteoblasts are actively synthesizing new bone on calcified cartilage (endochondral ossification).
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TS26: cartilage |
Absent |
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1K/L
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No expression in hypertrophic or degenerative cartilage cells.
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Specimen
2A/B:
embryonic day 14.5
(more )
Specimen
2A/B:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Specimen
2C:
embryonic day 16.5
(more )
Specimen
2C:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: upper jaw incisor |
Strong |
Regionally restricted |
2C
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High levels of expression in odontoblasts and in osteoblasts lining surfaces of newly synthesized fine cancellous intramembranous bone of maxilla. Expression in regions where precursor cells differentiate into active odontoblasts.
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TS24: upper jaw incisor dental papilla |
Weak |
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2C
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Little expression in most dental papilla cells.
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Specimen
2D:
embryonic day 16.5
(more )
Specimen
2D:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
2E:
embryonic day 18.5
(more )
Specimen
2E:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
3D:
embryonic day 14.5
(more )
Specimen
3D:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: rib cartilage condensation |
Present |
Regionally restricted |
3D
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Expression in osteoblasts of periosteal cuff of bone of rib cortex. Intense expression in derived from osteoprogenitor cells of the periosteum.
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Specimen
4A:
embryonic day 14.5
(more )
Specimen
4A:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: pancreatic acinus |
Strong |
Regionally restricted |
4A
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High levels of expression in acinar cells of pancreas. Maximum levels of expression in day 14.5 acini.
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Specimen
4B:
embryonic day 16.5
(more )
Specimen
4B:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
4C:
embryonic day 16.5
(more )
Specimen
4C:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Specimen
4D:
embryonic day 16.5
(more )
Specimen
4D:
(close )
Genetic Background:
|
CD-1
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Age:
|
embryonic day 16.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: nasal epithelium |
Present |
Regionally restricted |
4D
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Expression nasal glands and nasal epithelium.
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Specimen
5A:
embryonic day 18.5
(more )
Specimen
5A:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Structure |
Level |
Pattern |
Image |
Note |
TS26: brown fat |
Present |
Regionally restricted |
5A
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Expression at all sites of brown adipose tissue formation. Only certain areas were positive for expression. Expression in cells located at the extremities of the interscapular fat pad.
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Specimen
5B:
embryonic day 18.5
(more )
Specimen
5B:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 18.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS26: brown fat |
Present |
Regionally restricted |
5B
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Expression at all sites of brown adipose tissue formation. Expression in cells of interscapular brown adipose tissue. In the external region; only some cells were positive for expression.
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Specimen
day 10.5 not shown:
embryonic day 10.5
(more )
Specimen
day 10.5 not shown:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Specimen
day 11.5 not shown:
embryonic day 11.5
(more )
Specimen
day 11.5 not shown:
(close )
Genetic Background:
|
CD-1
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Age:
|
embryonic day 11.5
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Specimen
day 12.5 not shown:
embryonic day 12.5
(more )
Specimen
day 12.5 not shown:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: pancreas |
Present |
Regionally restricted |
|
Expression in acinar structures.
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Specimen
day 13.5 not shown:
embryonic day 13.5
(more )
Specimen
day 13.5 not shown:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Specimen
day 14.5 not shown:
embryonic day 14.5
(more )
Specimen
day 14.5 not shown:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 14.5
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Sex:
|
Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Specimen
day 16.5 not shown:
embryonic day 16.5
(more )
Specimen
day 16.5 not shown:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 16.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
day 18.5 not shown:
embryonic day 18.5
(more )
Specimen
day 18.5 not shown:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
|