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Gene Expression Data
Assay Details
Assay
Reference: J:165711 Mittal A, et al., Fibronectin and integrin alpha 5 play essential roles in the development of the cardiac neural crest. Mech Dev. 2010 Sep-Dec;127(9-12):472-84
Assay type: RNA in situ
MGI Accession ID: MGI:5789185
Gene symbol: Fn1
Gene name: fibronectin 1
Probe: Fn1 probe5
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1A: embryonic day 8.0 (more )
Note: 6-7 somite stage
Structure Level Pattern Image Note
TS12: neural fold Absent 1A Expression not detectable within dorsal neural folds.
TS12: embryo Strong Regionally restricted 1A High expression in region dorsal to heart.

Specimen 1B: embryonic day 8.0 (more )
Note: 6-7 somite stage
Structure Level Pattern Image Note
TS12: neural fold Absent 1B Expression not detectable within dorsal neural folds.
TS12: dorsal mesocardium Present 1B
TS12: foregut diverticulum endoderm Present 1B
TS12: splanchnopleure Present 1B

Specimen 1D: embryonic day 8.5 (more )
Note: 8-10 somite stage
Structure Level Pattern Image Note
TS13: neural fold Present 1D Expression at edges of dorsal neural tube.

Specimen 1E: embryonic day 8.5 (more )
Note: 10 somite stage
Structure Level Pattern Image Note
TS13: neural fold Present Regionally restricted 1E Expression in dorsal neural ectoderm in the top few cells layers.
TS13: surface ectoderm Present Regionally restricted 1E Expression in cells of apposing non-neural surface ectoderm.
TS13: branchial arch ectoderm Present 1E Expression in pharyngeal pocket endoderm and pharyngeal ectoderm.
TS13: branchial arch endoderm Present 1E Expression in pharyngeal pocket endoderm and pharyngeal ectoderm.

Specimen 1G: embryonic day 9.0 (more )
Note: 23 somite stage
Structure Level Pattern Image Note
TS14: central nervous system Present Regionally restricted 1G Expression maintained in dorsal neural tube.
TS14: branchial arch Present Regionally restricted 1G Expression within the region of branchial arches 3, 4 and 6.
TS14: blood vessel Present Regionally restricted 1G Expression in microvascular endothelial cells in the head.

Specimen S2A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural crest Present Regionally restricted S2A Expression in cardiac neural crest progenitors.
TS15: migrating neural crest Present Regionally restricted S2A Expression in cardiac neural crest cells.

Specimen S2B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch mesenchyme Weak S2B Expression downregulated within arch mesenchyme
TS15: branchial arch ectoderm Strong S2B Expression enriched in pharyngeal ectoderm and pharyngeal pocket endoderm.
TS15: branchial pouch endoderm Strong S2B Expression enriched in pharyngeal ectoderm and pharyngeal pocket endoderm.
TS15: outflow tract endocardial tube Present S2B Within the outflow tract, expression in mesenchymal cells (presumptive cardiac neural crest cells) and endocardial cells.
TS15: outflow tract mesenchyme Present S2B Within the outflow tract, expression in mesenchymal cells (presumptive cardiac neural crest cells) and endocardial cells.

Specimen S2B': embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch ectoderm Strong S2B' Expression enriched in pharyngeal ectoderm and pharyngeal pocket endoderm.
TS15: branchial pouch endoderm Strong S2B' Expression enriched in pharyngeal ectoderm and pharyngeal pocket endoderm.
TS15: branchial arch mesenchyme Weak S2B' Low levels of expression in mesenchymal cells lateral to the dorsal aorta and in pharyngeal arches.
TS15: trunk mesenchyme Weak S2B' Low levels of expression in mesenchymal cells lateral to the dorsal aorta and in pharyngeal arches.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory